RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 SARM1Q6SZW1 724 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 IL27RAQ6UWB1 636 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 NIPA2Q8N8Q9 360 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 GRIN3AQ8TCU5 1115 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 CASKIN2Q8WXE0 1202 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 HMCESQ96FZ2 354 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 PPP1R16AQ96I34 528 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 DEF6Q9H4E7 631 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 ABHD10Q9NUJ1 306 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 SLCO1B1Q9Y6L6 691 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 WASF2Q9Y6W5 498 aa23.4■■□□□ 1.34
CAPN1-222ENST00000532285 UPK3BL1B0FP48 263 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 UPK3BL2E5RIL1 263 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 MYO1FO00160 1098 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 KCNK5O95279 499 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 CSRP1P21291 193 aaKnown RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 CCNHP51946 323 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 SNRPD1P62314 119 aaKnown RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 RACK1P63244 317 aaKnown RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 ASTE1Q2TB18 679 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 INO80DQ53TQ3 878 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 RFX8Q6ZV50 586 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 OR2I1PQ8NGU4 316 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 ARRDC3Q96B67 414 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 ARHGEF26Q96DR7 871 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 HDAC8Q9BY41 377 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 TM6SF2Q9BZW4 377 aa23.39■■□□□ 1.33
CAPN1-222ENST00000532285 HECAQ9UBI9 543 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-222ENST00000532285 A0A1B0GVT2 93 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 LATO43561 262 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 MFAP3LO75121 409 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 GSRP00390 522 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 KCNA4P22459 653 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 NUDT1P36639 197 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 ADKP55263 362 aaKnown RBP23.38■■□□□ 1.33
CAPN1-222ENST00000532285 SLC14A1Q13336 389 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 PIP5KL1Q5T9C9 394 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 LEKR1Q6ZMV7 388 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 BTBD6Q96KE9 485 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 TRIM5Q9C035 493 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 KLC2Q9H0B6 622 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 ZDHHC6Q9H6R6 413 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 LRRC19Q9H756 370 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 ZWILCHQ9H900 591 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 EBF2Q9HAK2 575 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 PREBQ9HCU5 417 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 ANKRD6Q9Y2G4 727 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 SPTBN2O15020 2390 aa23.38■■□□□ 1.33
CAPN1-222ENST00000532285 AKR1B10O60218 316 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 GJB3O75712 270 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 TMCC1O94876 653 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 CER1O95813 267 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 H2AFZP0C0S5 128 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 ERCC2P18074 760 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 IL1R2P27930 398 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 TAS2R38P59533 333 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 BNC1Q01954 994 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 DPYSL2Q16555 572 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 H2AFVQ71UI9 128 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 ERN2Q76MJ5 926 aaKnown RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 ADAT2Q7Z6V5 191 aaKnown RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 PRPF39Q86UA1 669 aaKnown RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 TRIM69Q86WT6 500 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 CNGA4Q8IV77 575 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 RYBPQ8N488 228 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 OR2AP1Q8NGE2 309 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 ZNF564Q8TBZ8 553 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 TEKT4Q8WW24 435 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 CTNNBL1Q8WYA6 563 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 LRIG1Q96JA1 1093 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 GAREM1Q9H706 876 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 CWC15Q9P013 229 aaKnown RBP23.37■■□□□ 1.33
CAPN1-222ENST00000532285 UVRAGQ9P2Y5 699 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 KNL1Q8NG31 2342 aa23.37■■□□□ 1.33
CAPN1-222ENST00000532285 PCNX2A6NKB5 2137 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 ARHGAP42A6NI28 874 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 RNF103O00237 685 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 POP4O95707 220 aaKnown RBP23.36■■□□□ 1.33
CAPN1-222ENST00000532285 CEACAM1P13688 526 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 TCF4P15884 667 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 ITGB7P26010 798 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 ARL4AP40617 200 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 NOVA1P51513 510 aaKnown RBP23.36■■□□□ 1.33
CAPN1-222ENST00000532285 PPP2CBP62714 309 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 PPP2CAP67775 309 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 SMTNL2Q2TAL5 461 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 HLA-BQ31612 363 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 KCNT1Q5JUK3 1230 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 PSAPL1Q6NUJ1 521 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 NEK5Q6P3R8 708 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 HSPH1Q92598 858 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 SKA1Q96BD8 255 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 CELF6Q96J87 481 aaKnown RBP23.36■■□□□ 1.33
CAPN1-222ENST00000532285 SLC32A1Q9H598 525 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 CTTNBP2NLQ9P2B4 639 aa23.36■■□□□ 1.33
CAPN1-222ENST00000532285 AKR1B15C9JRZ8 316 aaPredicted RBP23.35■■□□□ 1.33
CAPN1-222ENST00000532285 H3BRJ5 948 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 RARAP10276 462 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 NEK3P51956 506 aa23.35■■□□□ 1.33
CAPN1-222ENST00000532285 TBX2Q13207 712 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms