RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 GLOD4Q9HC38 313 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 MED4Q9NPJ6 270 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 NDFIP2Q9NV92 336 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 RBM22Q9NW64 420 aaKnown RBP eCLIP10.04□□□□□ -0.83e-6■■■■□ 26.3
CTNND1-228ENST00000531007 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 SEPT3Q9UH03 358 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 FAM153AQ9UHL3 310 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 ATP8A1Q9Y2Q0 1164 aa10.04□□□□□ -0.8
CTNND1-228ENST00000531007 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-228ENST00000531007 MAGEB16A2A368 324 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 GOLGA6L10A6NI86 522 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 METTL18O95568 372 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 PEX11BO96011 259 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 HSD17B3P37058 310 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 MAGEA4P43358 317 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 MMP13P45452 471 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 MAPK8P45983 427 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 IRAK1P51617 712 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 SULT2A1Q06520 285 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 PDGFRLQ15198 375 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 E2F5Q15329 346 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 PREPLQ4J6C6 727 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 CCDC38Q502W7 563 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 STXBP5Q5T5C0 1151 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ALG1LQ6GMV1 187 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 LRRC8BQ6P9F7 803 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 SYCE2Q6PIF2 218 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ZNF354CQ86Y25 554 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ATP11CQ8NB49 1132 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ITFG1Q8TB96 612 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 BPIFB1Q8TDL5 484 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 OSCP1Q8WVF1 389 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 UBLCP1Q8WVY7 318 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 FGF13Q92913 245 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ASB16Q96NS5 453 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 AGAP3Q96P47 875 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 PSKH2Q96QS6 385 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 FEM1AQ9BSK4 669 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ROPN1BQ9BZX4 212 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 POLR1EQ9GZS1 481 aaKnown RBP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 MUC3BQ9H195 1237 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ROPN1Q9HAT0 212 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 PDFQ9HBH1 243 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ATP13A1Q9HD20 1204 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 UBA2Q9UBT2 640 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-228ENST00000531007 FETUBQ9UGM5 382 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 CDH7Q9ULB5 785 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 ATG2AQ2TAZ0 1938 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 CHD5Q8TDI0 1954 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 TRANK1O15050 2925 aa10.03□□□□□ -0.8
CTNND1-228ENST00000531007 NOTCH4Q99466 2003 aa10.02□□□□□ -0.8
CTNND1-228ENST00000531007 HOXC11O43248 304 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 RIPK2O43353 540 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 TSPAN3O60637 253 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 TCEA3O75764 348 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 TMEM63AO94886 807 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 NFATC1O95644 943 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 GLP2RO95838 553 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 EPOP01588 193 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 IVLP07476 585 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 CA4P22748 312 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 PSMB4P28070 264 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 HOXD9P28356 352 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 MAGEA3P43357 314 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 NPY2RP49146 381 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 NTHL1P78549 312 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 GAD2Q05329 585 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 CDH17Q12864 832 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 ZBTB17Q13105 803 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 NR1H3Q13133 447 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 LAMB3Q13751 1172 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 ZNF235Q14590 738 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 STAT4Q14765 748 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 RNF219Q5W0B1 726 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 KCTD11Q693B1 232 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 ZNF449Q6P9G9 518 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 CYS1Q717R9 158 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 PRUNE1Q86TP1 453 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 CCDC25Q86WR0 208 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 TP53INP2Q8IXH6 220 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 ADGRG2Q8IZP9 1017 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 CARNMT1Q8N4J0 409 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 DEFB123Q8N688 67 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 C12orf76Q8N812 135 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 CNTD1Q8N815 330 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 PYROXD1Q8WU10 500 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 DEPDC1BQ8WUY9 529 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 ATP2A3Q93084 1043 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 WBP2Q969T9 261 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 PABPC5Q96DU9 382 aaKnown RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 MYEOVQ96EZ4 313 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 IMP4Q96G21 291 aaKnown RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 SERPINB12Q96P63 405 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 XPO6Q96QU8 1125 aaKnown RBP10.02□□□□□ -0.81
CTNND1-228ENST00000531007 TMEM109Q9BVC6 243 aa10.02□□□□□ -0.81
CTNND1-228ENST00000531007 S1PR5Q9H228 398 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms