RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 AFMIDQ63HM1 303 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 DSG4Q86SJ6 1040 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 RYBPQ8N488 228 aaPredicted RBP19.06■□□□□ 0.64
GMDS-208ENST00000530927 PCDH20Q8N6Y1 951 aaKnown RBP19.06■□□□□ 0.64
GMDS-208ENST00000530927 C1orf216Q8TAB5 229 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 EXOC2Q96KP1 924 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 ZDHHC6Q9H6R6 413 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 PDFQ9HBH1 243 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 CAPN10Q9HC96 672 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 DLL3Q9NYJ7 618 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 EVLQ9UI08 416 aaPredicted RBP19.06■□□□□ 0.64
GMDS-208ENST00000530927 FZD4Q9ULV1 537 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 HYOU1Q9Y4L1 999 aa19.06■□□□□ 0.64
GMDS-208ENST00000530927 C4orf47A7E2U8 309 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 PRR5-ARHGAP8B1AHC4 643 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 C1QTNF3-AMACRE9PGA6 284 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 H3BRJ5 948 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 IL4RP24394 825 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 YBEYP58557 167 aaPredicted RBP19.05■□□□□ 0.64
GMDS-208ENST00000530927 TAS2R38P59533 333 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 ARHGAP8P85298 464 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 CYTH1Q15438 398 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 PIP5KL1Q5T9C9 394 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 KIAA0895LQ68EN5 471 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 NETO1Q8TDF5 533 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 TEKT4Q8WW24 435 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 TSC1Q92574 1164 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 NUSAP1Q9BXS6 441 aaKnown RBP19.05■□□□□ 0.64
GMDS-208ENST00000530927 PI4KAP42356 2102 aa19.05■□□□□ 0.64
GMDS-208ENST00000530927 EIF3CLB5ME19 914 aaKnown RBP19.04■□□□□ 0.64
GMDS-208ENST00000530927 C10orf142B7Z368 130 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 WNT9AO14904 365 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 INSIG1O15503 277 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 SERPINF2P08697 491 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 RECQLP46063 649 aaPredicted RBP19.04■□□□□ 0.64
GMDS-208ENST00000530927 ARSEP51690 589 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 NDST2P52849 883 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 CDH6P55285 790 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 BNC1Q01954 994 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 FAM46CQ5VWP2 391 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 SPC24Q8NBT2 197 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 OR2T34Q8NGX1 318 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 FAM131CQ96AQ9 280 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 CCDC114Q96M63 670 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 EIF3CQ99613 913 aaKnown RBP19.04■□□□□ 0.64
GMDS-208ENST00000530927 NCAPGQ9BPX3 1015 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 GTPBP2Q9BX10 602 aaKnown RBP19.04■□□□□ 0.64
GMDS-208ENST00000530927 LHX3Q9UBR4 397 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 SLC6A14Q9UN76 642 aa19.04■□□□□ 0.64
GMDS-208ENST00000530927 FARP1Q9Y4F1 1045 aaPredicted RBP19.04■□□□□ 0.64
GMDS-208ENST00000530927 KRIT1O00522 736 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 PLRG1O43660 514 aaKnown RBP19.03■□□□□ 0.64
GMDS-208ENST00000530927 PRAMEF11O60813 436 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 GJB3O75712 270 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 MAT2AP31153 395 aaKnown RBP19.03■□□□□ 0.64
GMDS-208ENST00000530927 HOXD12P35452 270 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 ARL4AP40617 200 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 HCAR3P49019 387 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 KRT81Q14533 505 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 TMIEQ8NEW7 156 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 HEPHQ9BQS7 1158 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 GOLPH3Q9H4A6 298 aa19.03■□□□□ 0.64
GMDS-208ENST00000530927 UBA2Q9UBT2 640 aaPredicted RBP19.03■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3DA0A087WVF3 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3IA0A087WXS9 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3EA0A087X179 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3KA0A087X1G2 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3FA6NER0 549 aaPredicted RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 LRRC72A6NJI9 287 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3LB9A6J9 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 SLC30A4O14863 429 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 BCAT2O15382 392 aaPredicted RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 MAP3K6O95382 1288 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 PRNPP04156 253 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3HP0C7X1 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 RGRP47804 291 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 CSNK1EP49674 416 aaKnown RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 GEMIN4P57678 1058 aaKnown RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 GRIK2Q13002 908 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 DPYSL3Q14195 570 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 LRRC73Q5JTD7 316 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3GQ6DHY5 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3CQ6IPX1 549 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 PARS2Q7L3T8 475 aaKnown RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 TBC1D3Q8IZP1 549 aaPredicted RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 OR2AP1Q8NGE2 309 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 CEP76Q8TAP6 659 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 RFFLQ8WZ73 363 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 KLK6Q92876 244 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 ISG20Q96AZ6 181 aaKnown RBP19.02■□□□□ 0.64
GMDS-208ENST00000530927 SLC6A18Q96N87 628 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 PANX2Q96RD6 677 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 PCED1AQ9H1Q7 454 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 TM9SF3Q9HD45 589 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 IMPACTQ9P2X3 320 aa19.02■□□□□ 0.64
GMDS-208ENST00000530927 DOCK9Q9BZ29 2069 aa19.02■□□□□ 0.63
GMDS-208ENST00000530927 A0A1B0GTW7 788 aa19.01■□□□□ 0.63
GMDS-208ENST00000530927 A0A1B0GVT2 93 aa19.01■□□□□ 0.63
GMDS-208ENST00000530927 RCCD1A6NED2 376 aa19.01■□□□□ 0.63
GMDS-208ENST00000530927 ZSCAN5CA6NGD5 496 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms