RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 TMEM253P0C7T8 217 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 TBC1D3HP0C7X1 549 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 ERCC2P18074 760 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 IL1R2P27930 398 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 ARL4AP40617 200 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 AFF3P51826 1226 aaKnown RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 CCNHP51946 323 aaPredicted RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 SNRPD1P62314 119 aaKnown RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 FOXK2Q01167 660 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 TEAD4Q15561 434 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 DPYSL2Q16555 572 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 HADHQ16836 314 aaKnown RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 POM121L1PQ3SYA9 428 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 INO80DQ53TQ3 878 aaPredicted RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 KCNT1Q5JUK3 1230 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 AGBL4Q5VU57 503 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 TBC1D3GQ6DHY5 549 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 TBC1D3CQ6IPX1 549 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 TBC1D3Q8IZP1 549 aaPredicted RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 GRIN3AQ8TCU5 1115 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 LRIG1Q96JA1 1093 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 CHP1Q99653 195 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 TM6SF2Q9BZW4 377 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 RBSNQ9H1K0 784 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 LRRC19Q9H756 370 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 FSCN3Q9NQT6 498 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 CWC15Q9P013 229 aaKnown RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 HECAQ9UBI9 543 aaPredicted RBP17.38■□□□□ 0.37
CCS-205ENST00000530384 WASF2Q9Y6W5 498 aa17.38■□□□□ 0.37
CCS-205ENST00000530384 C10orf142B7Z368 130 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 PLK4O00444 970 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 LEFTY1O75610 366 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 TMCC1O94876 653 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 RARAP10276 462 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 GRIA4P48058 902 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 GRIK2Q13002 908 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 SMTNL2Q2TAL5 461 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 UAP1L1Q3KQV9 507 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 ARSIQ5FYB1 569 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 MINDY1Q8N5J2 469 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 LZTR1Q8N653 840 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 OR2AP1Q8NGE2 309 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 HSPH1Q92598 858 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 PACSIN1Q9BY11 444 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 TM9SF3Q9HD45 589 aa17.37■□□□□ 0.37
CCS-205ENST00000530384 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCS-205ENST00000530384 CNOT1A5YKK6 2376 aaKnown RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 PLXNA2O75051 1894 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 OPHN1O60890 802 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 POP4O95707 220 aaKnown RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 TCF4P15884 667 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 ITGB7P26010 798 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 NUDT1P36639 197 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 RACK1P63244 317 aaKnown RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 SLC25A11Q02978 314 aaKnown RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 DPYSQ14117 519 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 PIP5KL1Q5T9C9 394 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 IL27RAQ6UWB1 636 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 LEKR1Q6ZMV7 388 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 ERN2Q76MJ5 926 aaKnown RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 TRIM69Q86WT6 500 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 RYBPQ8N488 228 aaPredicted RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 ARRDC3Q96B67 414 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 CELF6Q96J87 481 aaKnown RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 GDAP1L1Q96MZ0 367 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 ORAI3Q9BRQ5 295 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 HDAC8Q9BY41 377 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 KLC2Q9H0B6 622 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 ZDHHC6Q9H6R6 413 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 PREBQ9HCU5 417 aa17.36■□□□□ 0.37
CCS-205ENST00000530384 UBA2Q9UBT2 640 aaPredicted RBP17.36■□□□□ 0.37
CCS-205ENST00000530384 LATO43561 262 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 PRAMEF11O60813 436 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 PROSCO94903 275 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 IGSF6O95976 241 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 SSR1P43307 286 aaKnown RBP17.35■□□□□ 0.37
CCS-205ENST00000530384 CSNK1EP49674 416 aaKnown RBP17.35■□□□□ 0.37
CCS-205ENST00000530384 PAPOLAP51003 745 aaKnown RBP17.35■□□□□ 0.37
CCS-205ENST00000530384 ZNF75DP51815 510 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 NEK3P51956 506 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 RHOAP61586 193 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 RAD51Q06609 339 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 AFMIDQ63HM1 303 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 NEK5Q6P3R8 708 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 POLNQ7Z5Q5 900 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 PRPF39Q86UA1 669 aaKnown RBP17.35■□□□□ 0.37
CCS-205ENST00000530384 SKA1Q96BD8 255 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 OSBPL1AQ9BXW6 950 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 SLC39A8Q9C0K1 460 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 SPTLC3Q9NUV7 552 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 DNAAF2Q9NVR5 837 aaKnown RBP17.35■□□□□ 0.37
CCS-205ENST00000530384 RCOR3Q9P2K3 495 aaPredicted RBP17.35■□□□□ 0.37
CCS-205ENST00000530384 SLCO1B1Q9Y6L6 691 aa17.35■□□□□ 0.37
CCS-205ENST00000530384 A0A1B0GVT2 93 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 KRIT1O00522 736 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 CACNA1AO00555 2505 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 CER1O95813 267 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 MAN1A1P33908 653 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 TAS2R38P59533 333 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms