RNA–Protein interactions for RNA: ENST00000528873.2

GEN1-204, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 5

Gene GEN1, Length 871 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-204ENST00000528873 TRAF3Q13114 568 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 HDAC1Q13547 482 aaPredicted RBP4.33□□□□□ -1.72
GEN1-204ENST00000528873 BLMHQ13867 455 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 KRT81Q14533 505 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 SLC39A14Q15043 492 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 KIF19Q2TAC6 998 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 CCDC38Q502W7 563 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 C9orf57Q5W0N0 161 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 TANGO2Q6ICL3 276 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 RASGRP2Q7LDG7 609 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 TMC8Q8IU68 726 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 CCDC146Q8IYE0 955 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 RBFAQ8N0V3 343 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 GALNT15Q8N3T1 639 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 TCP11L2Q8N4U5 519 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 CSGALNACT1Q8TDX6 532 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 TMEM18Q96B42 140 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 SLC25A33Q9BSK2 321 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 C1QTNF4Q9BXJ3 329 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 OCIAD1Q9NX40 245 aa4.33□□□□□ -1.72
GEN1-204ENST00000528873 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 OR6C68A6NDL8 312 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 SMTNL1A8MU46 457 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 KDM4EB2RXH2 506 aaPredicted RBP4.32□□□□□ -1.72
GEN1-204ENST00000528873 LDB3O75112 727 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 SERPINI2O75830 405 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 IL1AP01583 271 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 IGKV3-20P01619 116 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 YWHAQP27348 245 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 MVDP53602 400 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 ARHGAP8P85298 464 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 EEF1A2Q05639 463 aaKnown RBP4.32□□□□□ -1.72
GEN1-204ENST00000528873 MYBPC2Q14324 1141 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 SMAD1Q15797 465 aaKnown RBP4.32□□□□□ -1.72
GEN1-204ENST00000528873 NCAPH2Q6IBW4 605 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.32□□□□□ -1.72
GEN1-204ENST00000528873 RUBCNQ92622 972 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 LTV1Q96GA3 475 aaPredicted RBP4.32□□□□□ -1.72
GEN1-204ENST00000528873 DUX5Q96PT3 197 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 FIZ1Q96SL8 496 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 HERC2P3Q9BVR0 1158 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 PLCB1Q9NQ66 1216 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 DAAM1Q9Y4D1 1078 aa4.32□□□□□ -1.72
GEN1-204ENST00000528873 A0A096LPK6 155 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 IGHV4-28A0A0C4DH34 117 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 LINC01553A4QN01 128 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 ZNF432O94892 652 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 CKMT1AP12532 417 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 CST5P28325 142 aaPredicted RBP4.31□□□□□ -1.72
GEN1-204ENST00000528873 C21orf33P30042 268 aaPredicted RBP4.31□□□□□ -1.72
GEN1-204ENST00000528873 GPR12P47775 334 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 TUBA1BP68363 451 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 FOXO1Q12778 655 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 THOC5Q13769 683 aaKnown RBP4.31□□□□□ -1.72
GEN1-204ENST00000528873 BYSLQ13895 437 aaKnown RBP4.31□□□□□ -1.72
GEN1-204ENST00000528873 TIGD6Q17RP2 521 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 AP5B1Q2VPB7 878 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 TBC1D9BQ66K14 1250 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 USP43Q70EL4 1123 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 CACNA2D3Q8IZS8 1091 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 POF1BQ8WVV4 589 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 NCSTNQ92542 709 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 ATOH1Q92858 354 aaPredicted RBP4.31□□□□□ -1.72
GEN1-204ENST00000528873 KTI12Q96EK9 354 aaPredicted RBP4.31□□□□□ -1.72
GEN1-204ENST00000528873 RETREG1Q9H6L5 497 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 ZNF556Q9HAH1 456 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 GRHL1Q9NZI5 618 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 MDFICQ9P1T7 246 aa4.31□□□□□ -1.72
GEN1-204ENST00000528873 IGLV5-52A0A0A0MRZ9 124 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 LOC102724159A0A0B4J2E5 919 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 A0A1B0GVM2 712 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 PLSCR5A0PG75 271 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 C17orf100A8MU93 164 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 FAM157AC9JC47 383 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 METTL18O95568 372 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 CSF1P09603 554 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 MTNR1AP48039 350 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 PRKAA2P54646 552 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 BNC1Q01954 994 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 POU3F1Q03052 451 aaPredicted RBP4.3□□□□□ -1.72
GEN1-204ENST00000528873 GRSF1Q12849 480 aaKnown RBP eCLIP4.3□□□□□ -1.72
GEN1-204ENST00000528873 IL13RA2Q14627 380 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 PWP2Q15269 919 aaKnown RBP4.3□□□□□ -1.72
GEN1-204ENST00000528873 EFHC1Q5JVL4 640 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 PATL1Q86TB9 770 aaKnown RBP4.3□□□□□ -1.72
GEN1-204ENST00000528873 NEXN-AS1Q8NBZ9 246 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 WFIKKN2Q8TEU8 576 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 NPFFR1Q9GZQ6 430 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 CXorf56Q9H5V9 222 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 CHODLQ9H9P2 273 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 G6PC2Q9NQR9 355 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 NLKQ9UBE8 527 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 GRHPRQ9UBQ7 328 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 FBXO40Q9UH90 709 aa4.3□□□□□ -1.72
GEN1-204ENST00000528873 SRP68Q9UHB9 627 aaKnown RBP4.3□□□□□ -1.72
GEN1-204ENST00000528873 AGO1Q9UL18 857 aaKnown RBP4.3□□□□□ -1.72
GEN1-204ENST00000528873 SRRM3A6NNA2 597 aaPredicted RBP4.29□□□□□ -1.72
GEN1-204ENST00000528873 IPO5O00410 1097 aaKnown RBP4.29□□□□□ -1.72
GEN1-204ENST00000528873 CHL1O00533 1208 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms