RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 ISG20Q96AZ6 181 aaKnown RBP17.68■□□□□ 0.42
LTBP3-208ENST00000527339 TOE1Q96GM8 510 aaKnown RBP17.68■□□□□ 0.42
LTBP3-208ENST00000527339 KLC2Q9H0B6 622 aa17.68■□□□□ 0.42
LTBP3-208ENST00000527339 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
LTBP3-208ENST00000527339 ITPR1Q14643 2758 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 MID1O15344 667 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 BNIP3LO60238 219 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ZNF821O75541 412 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-208ENST00000527339 IL1BP01584 269 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 C5AR1P21730 350 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 SLC8A1P32418 973 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 RECQLP46063 649 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-208ENST00000527339 PSMD8P48556 350 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 DHPSP49366 369 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ARSEP51690 589 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 PDK2Q15119 407 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ATP13A4Q4VNC1 1196 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 FAM46CQ5VWP2 391 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 MAP7D3Q8IWC1 876 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ARHGAP12Q8IWW6 846 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 OR2A12Q8NGT7 310 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 CASKIN2Q8WXE0 1202 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 CELF6Q96J87 481 aaKnown RBP17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ZNF670Q9BS34 389 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 SLC39A8Q9C0K1 460 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 NCKAP1Q9Y2A7 1128 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 FCF1Q9Y324 198 aaKnown RBP17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ACTL7AQ9Y615 435 aa17.67■□□□□ 0.42
LTBP3-208ENST00000527339 ANKRD11Q6UB99 2663 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-208ENST00000527339 SHROOM3Q8TF72 1996 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 LOC400499M0QZD8 3231 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 C1QTNF3-AMACRE9PGA6 284 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 BUB1O43683 1085 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 CD48P09326 243 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 AMPD1P23109 780 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 DPYSL3Q14195 570 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 INO80DQ53TQ3 878 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-208ENST00000527339 LRRC38Q5VT99 294 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 PLPP6Q8IY26 295 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 NPWQ8N729 165 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 KDF1Q8NAX2 398 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-208ENST00000527339 CALR3Q96L12 384 aaKnown RBP17.66■□□□□ 0.42
LTBP3-208ENST00000527339 CALN1Q9BXU9 219 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 BTBD1Q9H0C5 482 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 TNKS2Q9H2K2 1166 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 GRPEL1Q9HAV7 217 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 TMEM74BQ9NUR3 256 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 FBXL12Q9NXK8 326 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 PPM1HQ9ULR3 514 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 TFR2Q9UP52 801 aa17.66■□□□□ 0.42
LTBP3-208ENST00000527339 REXO2Q9Y3B8 237 aaKnown RBP17.66■□□□□ 0.42
LTBP3-208ENST00000527339 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 BTNL10A8MVZ5 291 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 BUB1BO60566 1050 aaPredicted RBP17.65■□□□□ 0.42
LTBP3-208ENST00000527339 PRAMEF11O60813 436 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 PRNPP04156 253 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 IL4RP24394 825 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 CHRNA3P32297 505 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 SERPINB6P35237 376 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 DPP6P42658 865 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 PTGER3P43115 390 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 PAPOLAP51003 745 aaKnown RBP17.65■□□□□ 0.42
LTBP3-208ENST00000527339 VAV2P52735 878 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 ZNF33AQ06730 810 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 MMRN1Q13201 1228 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 CARD16Q5EG05 197 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 ZFYVE27Q5T4F4 411 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 LYSMD4Q5XG99 296 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 DPY19L3Q6ZPD9 716 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 CYP2U1Q7Z449 544 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 FAM124AQ86V42 546 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 TXLNBQ8N3L3 684 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 ACRBPQ8NEB7 543 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 TMIEQ8NEW7 156 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 CADM4Q8NFZ8 388 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 PIP4K2CQ8TBX8 421 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 GANCQ8TET4 914 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 GATA6Q92908 595 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 FOXJ1Q92949 421 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 ZNF419Q96HQ0 510 aaPredicted RBP17.65■□□□□ 0.42
LTBP3-208ENST00000527339 OMDQ99983 421 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 GPR174Q9BXC1 333 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 PCED1AQ9H1Q7 454 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 SGK2Q9HBY8 427 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 ETNK2Q9NVF9 386 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 KLHL11Q9NVR0 708 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 FZD4Q9ULV1 537 aa17.65■□□□□ 0.42
LTBP3-208ENST00000527339 SMG1Q96Q15 3661 aaKnown RBP17.65■□□□□ 0.42
LTBP3-208ENST00000527339 A0A1W2PP55 124 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 RCCD1A6NED2 376 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 DFFAO00273 331 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 KHNYNO15037 678 aaKnown RBP17.64■□□□□ 0.41
LTBP3-208ENST00000527339 PJA2O43164 708 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 SPOPO43791 374 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 RNASEH2AO75792 299 aaKnown RBP17.64■□□□□ 0.41
LTBP3-208ENST00000527339 TMCC1O94876 653 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 GSRP00390 522 aa17.64■□□□□ 0.41
LTBP3-208ENST00000527339 COMTP21964 271 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms