RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PSMD8P48556 350 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 CCNHP51946 323 aaPredicted RBP17.55■□□□□ 0.4
LMX1B-203ENST00000526117 CCZ1BP86790 482 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 CCZ1P86791 482 aaPredicted RBP17.55■□□□□ 0.4
LMX1B-203ENST00000526117 NSUN2Q08J23 767 aaKnown RBP eCLIP17.55■□□□□ 0.4
LMX1B-203ENST00000526117 CCDC15Q0P6D6 951 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 GALNT2Q10471 571 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 GRM3Q14832 879 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 PLA2G2CQ5R387 149 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 SYCE1Q8N0S2 351 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 VOPP1Q96AW1 172 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 PPP1R16AQ96I34 528 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 GDAP1L1Q96MZ0 367 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 TSGA13Q96PP4 275 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 OSBPL1AQ9BXW6 950 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 TNKS2Q9H2K2 1166 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 KLHL11Q9NVR0 708 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 FBXL12Q9NXK8 326 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 NCDNQ9UBB6 729 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 ACTL7AQ9Y615 435 aa17.55■□□□□ 0.4
LMX1B-203ENST00000526117 BCLAF3A2AJT9 711 aaKnown RBP17.54■□□□□ 0.4
LMX1B-203ENST00000526117 CCDC66A2RUB6 948 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 GRID2IPA4D2P6 1211 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 MFSD11O43934 449 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 IGSF6O95976 241 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 PEX11BO96011 259 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 KRT1P04264 644 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 CTNNA2P26232 953 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 HSPA9P38646 679 aaKnown RBP17.54■□□□□ 0.4
LMX1B-203ENST00000526117 CDKN2BP42772 138 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 COPS2P61201 443 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 ZNF33AQ06730 810 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 CYTH1Q15438 398 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 ZFYVE27Q5T4F4 411 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 CHST14Q8NCH0 376 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 EXD1Q8NHP7 514 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 HCAR2Q8TDS4 363 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 PDLIM2Q96JY6 352 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 PSKH2Q96QS6 385 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 OMDQ99983 421 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 HDAC8Q9BY41 377 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 CPEB1Q9BZB8 566 aaKnown RBP17.54■□□□□ 0.4
LMX1B-203ENST00000526117 SP110Q9HB58 689 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 LHX3Q9UBR4 397 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 SERGEFQ9UGK8 458 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 HYOU1Q9Y4L1 999 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 PCDHA3Q9Y5H8 950 aa17.54■□□□□ 0.4
LMX1B-203ENST00000526117 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 PLRG1O43660 514 aaKnown RBP17.53■□□□□ 0.4
LMX1B-203ENST00000526117 KRT86O43790 486 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 LEFTY1O75610 366 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 PALMO75781 387 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 SEMA4FO95754 770 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 MX2P20592 715 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 TGM1P22735 817 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 ITGB7P26010 798 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 ACSL1P33121 698 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 PTPN7P35236 360 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 GARSP41250 739 aaKnown RBP17.53■□□□□ 0.4
LMX1B-203ENST00000526117 RENBPP51606 427 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 RHOAP61586 193 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 RAD51Q06609 339 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 PPP2R5EQ16537 467 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 LPAL2Q16609 132 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 MYLK3Q32MK0 819 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 ODF2Q5BJF6 829 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 LYSMD4Q5XG99 296 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 ARHGAP36Q6ZRI8 547 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 RABEPKQ7Z6M1 372 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 CACUL1Q86Y37 369 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 TP53INP2Q8IXH6 220 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 TMEFF1Q8IYR6 380 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 RCOR2Q8IZ40 523 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 HDDC3Q8N4P3 179 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 ATPAF2Q8N5M1 289 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 PLD5Q8N7P1 536 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 OR2T34Q8NGX1 318 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 DNASE2BQ8WZ79 361 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 HDAC11Q96DB2 347 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 RBM41Q96IZ5 413 aaKnown RBP17.53■□□□□ 0.4
LMX1B-203ENST00000526117 GPR174Q9BXC1 333 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 TM6SF2Q9BZW4 377 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 NEUROG2Q9H2A3 272 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 GOLPH3Q9H4A6 298 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 DTLQ9NZJ0 730 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 SEPT3Q9UH03 358 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 AMACRQ9UHK6 382 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 EFR3BQ9Y2G0 817 aa17.53■□□□□ 0.4
LMX1B-203ENST00000526117 NUP205Q92621 2012 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 A0A1W2PP55 124 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 LRRC72A6NJI9 287 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 METTL12A8MUP2 240 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 RNASEH2AO75792 299 aaKnown RBP17.52■□□□□ 0.4
LMX1B-203ENST00000526117 ZRANB2O95218 330 aaKnown RBP eCLIP17.52■□□□□ 0.4
LMX1B-203ENST00000526117 CCDC175P0C221 793 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 CCNCP24863 283 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 MPLP40238 635 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 PTGER3P43115 390 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms