RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PDILTQ8N807 584 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 KLHDC9Q8NEP7 349 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 LRTOMTQ8WZ04 291 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 MRPS27Q92552 414 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 ATP6V0A1Q93050 837 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 CCDC34Q96HJ3 373 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 NAF1Q96HR8 494 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 PBKQ96KB5 322 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 MESP1Q9BRJ9 268 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 MMTAG2Q9BU76 263 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 ZNF518BQ9C0D4 1074 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.86□□□□□ -1.63
USP48-211ENST00000526044 NT5C3AQ9H0P0 336 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 SMURF2Q9HAU4 748 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 ARNT2Q9HBZ2 717 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 KIAA1586Q9HCI6 787 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 DDX19AQ9NUU7 478 aaKnown RBP4.86□□□□□ -1.63
USP48-211ENST00000526044 ZSCAN32Q9NX65 697 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 ERAP1Q9NZ08 941 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 EHD3Q9NZN3 535 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 SLC17A6Q9P2U8 582 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 KDM3AQ9Y4C1 1321 aa4.86□□□□□ -1.63
USP48-211ENST00000526044 E9PMD0 336 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 IFRD1O00458 451 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 PPM1DO15297 605 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CTAGE5O15320 804 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 HBP1O60381 514 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 MGEA5O60502 916 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 KINO60870 393 aaKnown RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 CAND2O75155 1236 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 LYPLA2O95372 231 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 SGPL1O95470 568 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 MBD3O95983 291 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 RHOP08100 348 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 MMP3P08254 477 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CAPN2P17655 700 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CD53P19397 219 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 YWHABP31946 246 aaKnown RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 STAT6P42226 847 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CLK3P49761 638 aaKnown RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 SLC26A2P50443 739 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 PSMC6P62333 389 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 KARSQ15046 597 aaKnown RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 POLD3Q15054 466 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 MGAT5BQ3V5L5 792 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 XKR9Q5GH70 373 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 XKR3Q5GH77 459 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 HYIQ5T013 277 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 TEDDM1Q5T9Z0 273 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 ARHGAP40Q5TG30 622 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 GRASPQ7Z6J2 395 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 GAS2L3Q86XJ1 694 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CCDC60Q8IWA6 550 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 CEP57L1Q8IYX8 460 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 MPP5Q8N3R9 675 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 SYT2Q8N9I0 419 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 CNNM3Q8NE01 707 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 ENGASEQ8NFI3 743 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 AFAP1L1Q8TED9 768 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 PIGOQ8TEQ8 1089 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 ATRIPQ8WXE1 791 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 RAD54LQ92698 747 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 DHX58Q96C10 678 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 TIGD1Q96MW7 591 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 DEFB118Q96PH6 123 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 PCYT2Q99447 389 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 LXNQ9BS40 222 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 MTG1Q9BT17 334 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 LRRC27Q9C0I9 530 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 MS4A7Q9GZW8 240 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 UPF3AQ9H1J1 476 aaKnown RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 BHMT2Q9H2M3 363 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CUEDC2Q9H467 287 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 ANKEF1Q9NU02 776 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 HOOK1Q9UJC3 728 aaKnown RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 ZNF215Q9UL58 517 aaPredicted RBP4.85□□□□□ -1.63
USP48-211ENST00000526044 HPSEQ9Y251 543 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 SYNRGQ9UMZ2 1314 aa4.85□□□□□ -1.63
USP48-211ENST00000526044 LOXHD1Q8IVV2 1947 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 EMSYQ7Z589 1322 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ARHGEF35A5YM69 484 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 RRN3P2A6NIE6 340 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 KBTBD13C9JR72 458 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 MGST3O14880 152 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 MAGEB2O15479 319 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 TLR5O60602 858 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 CABYRO75952 493 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 STBD1O95210 358 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 LGALS2P05162 132 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 KRT18P05783 430 aaKnown RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 ASGR1P07306 291 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 PLA2G4BP0C869 781 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ZNF286BP0CG31 522 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 NR2F6P10588 404 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 MYF5P13349 255 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 BRAFP15056 766 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 ZFXP17010 805 aaPredicted RBP4.84□□□□□ -1.63
USP48-211ENST00000526044 RHCEP18577 417 aa4.84□□□□□ -1.63
USP48-211ENST00000526044 MARK3P27448 753 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms