RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 LYL1P12980 280 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 ABCB4P21439 1286 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 DCTDP32321 178 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 DPP6P42658 865 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 HDAC1Q13547 482 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-210ENST00000525878 HLTFQ14527 1009 aaKnown RBP eCLIP4.25□□□□□ -1.73
CSDE1-210ENST00000525878 GALNTL6Q49A17 601 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 ADAM5Q6NVV9 412 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 C9orf139Q6ZV77 190 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 SYTL1Q8IYJ3 562 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 ANKRD13AQ8IZ07 590 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 PGBD5Q8N414 524 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 LMNTD1Q8N9Z9 388 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 DEPTORQ8TB45 409 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 PARD3BQ8TEW8 1205 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 SORCS1Q8WY21 1168 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 KCNJ9Q92806 393 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 TMEM41AQ96HV5 264 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 PIGSQ96S52 555 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 NPFFR1Q9GZQ6 430 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 LHPPQ9H008 270 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 UPB1Q9UBR1 384 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 PHTF1Q9UMS5 762 aa4.25□□□□□ -1.73
CSDE1-210ENST00000525878 KDM4EB2RXH2 506 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-210ENST00000525878 HNRNPRO43390 633 aaKnown RBP4.24□□□□□ -1.73
CSDE1-210ENST00000525878 LMX1BO60663 402 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 TNFRSF6BO95407 300 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 CKMT1AP12532 417 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 GYS1P13807 737 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 ANOS1P23352 680 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 AVPR2P30518 371 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 CEP85LQ5SZL2 805 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 ATPAF1Q5TC12 328 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-210ENST00000525878 NCAPH2Q6IBW4 605 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 RHBDF2Q6PJF5 856 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 PTGR2Q8N8N7 351 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-210ENST00000525878 SCAIQ8N9R8 606 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 PGLYRP2Q96PD5 576 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 KATNAL1Q9BW62 490 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 KLQ9UEF7 1012 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 NFS1Q9Y697 457 aa4.24□□□□□ -1.73
CSDE1-210ENST00000525878 KIF1CO43896 1103 aaKnown RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 AFPP02771 609 aaKnown RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 CYP4B1P13584 511 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 AMD1P17707 334 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 FMO4P31512 558 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 CRIP2P52943 208 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 PNLIPRP1P54315 467 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 CCDC6Q16204 474 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 XKR9Q5GH70 373 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 STPG1Q5TH74 334 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 SLC44A2Q8IWA5 706 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 CCAR1Q8IX12 1150 aaKnown RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 OR4N2Q8NGD1 307 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 RFWD2Q8NHY2 731 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 SCMH1Q96GD3 660 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 KRTAP4-4Q9BYR3 166 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 METTL14Q9HCE5 456 aaKnown RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 PRDM8Q9NQV8 689 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 CHST12Q9NRB3 414 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 GRHL1Q9NZI5 618 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 MALT1Q9UDY8 824 aa4.23□□□□□ -1.73
CSDE1-210ENST00000525878 C19orf53Q9UNZ5 99 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 MORC2Q9Y6X9 1032 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-210ENST00000525878 TARSL2A2RTX5 802 aaKnown RBP4.22□□□□□ -1.73
CSDE1-210ENST00000525878 CCNT1O60563 726 aaKnown RBP4.22□□□□□ -1.73
CSDE1-210ENST00000525878 ARSAP15289 507 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 CHN1P15882 459 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 PEX5P50542 639 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 RPS6KA3P51812 740 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 ST3GAL1Q11201 340 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 FAM69BQ5VUD6 431 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 PMS2CLQ68D20 193 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 DGAT2L7PQ6IED9 249 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 TYW3Q6IPR3 259 aaKnown RBP4.22□□□□□ -1.73
CSDE1-210ENST00000525878 RINLQ6ZS11 566 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 BRSK2Q8IWQ3 736 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 ANKRD44Q8N8A2 993 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 SCAMP5Q8TAC9 235 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 MMP28Q9H239 520 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 EVA1AQ9H8M9 152 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 UBTD1Q9HAC8 227 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 FBXO40Q9UH90 709 aa4.22□□□□□ -1.73
CSDE1-210ENST00000525878 SNED1Q8TER0 1413 aa4.21□□□□□ -1.73
CSDE1-210ENST00000525878 CHL1O00533 1208 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 TIMM23O14925 209 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 ITGA2BP08514 1039 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 IGHV4-30-4P0DP06 118 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 DGKAP23743 735 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 YWHAQP27348 245 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 GPR12P47775 334 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 CXCR3P49682 368 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 FAM27E3Q08E93 113 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 DHX34Q14147 1143 aaKnown RBP4.21□□□□□ -1.74
CSDE1-210ENST00000525878 TUBA1AQ71U36 451 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 CPT1BQ92523 772 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 ZNF385AQ96PM9 386 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms