RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PCSK4Q6UW60 755 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 KYAT3Q6YP21 454 aaKnown RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 DCP2Q8IU60 420 aaKnown RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 ZNF548Q8NEK5 533 aaPredicted RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 FAM174AQ8TBP5 190 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 IFI44Q8TCB0 444 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 MAPK15Q8TD08 544 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 NT5C3BQ969T7 300 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 PGAP3Q96FM1 320 aaPredicted RBP24.44■■□□□ 1.5
USP47-205ENST00000525257 HIC2Q96JB3 615 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 DUSP23Q9BVJ7 150 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 GPR27Q9NS67 375 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 HS3ST3A1Q9Y663 406 aa24.44■■□□□ 1.5
USP47-205ENST00000525257 TENM4Q6N022 2769 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 IGLV3-10A0A075B6K4 115 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 GTPBP10A4D1E9 387 aaKnown RBP24.43■■□□□ 1.5
USP47-205ENST00000525257 RAD51BO15315 384 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 PAK4O96013 591 aaPredicted RBP24.43■■□□□ 1.5
USP47-205ENST00000525257 F9P00740 461 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 PLA2G2AP14555 144 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 SERPINH1P50454 418 aaKnown RBP24.43■■□□□ 1.5
USP47-205ENST00000525257 FAM102AQ5T9C2 384 aaPredicted RBP24.43■■□□□ 1.5
USP47-205ENST00000525257 LSMEM2Q8N112 164 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 FAM181AQ8N9Y4 354 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 C1orf74Q96LT6 269 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 PDCL3Q9H2J4 239 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 USP29Q9HBJ7 922 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 ATP13A1Q9HD20 1204 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 EVA1BQ9NVM1 165 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 FADS3Q9Y5Q0 445 aa24.43■■□□□ 1.5
USP47-205ENST00000525257 ILVBLA1L0T0 632 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 ITGB7P26010 798 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 MTIF2P46199 727 aaKnown RBP24.42■■□□□ 1.5
USP47-205ENST00000525257 SLC25A52Q3SY17 297 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 ARTNQ5T4W7 220 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 BROXQ5VW32 411 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 RETSATQ6NUM9 610 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 PARS2Q7L3T8 475 aaKnown RBP24.42■■□□□ 1.5
USP47-205ENST00000525257 ZNF605Q86T29 641 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 IRF2BP1Q8IU81 584 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 TMEM35BQ8NCS4 154 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 FEM1CQ96JP0 617 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 HEPHQ9BQS7 1158 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 CEP44Q9C0F1 390 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 POLR1BQ9H9Y6 1135 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 CPNE5Q9HCH3 593 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 FCF1Q9Y324 198 aaKnown RBP24.42■■□□□ 1.5
USP47-205ENST00000525257 ACTL7AQ9Y615 435 aa24.42■■□□□ 1.5
USP47-205ENST00000525257 SPTY2D1-AS1A0A0U1RR47 76 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 H3BM21 787 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 ZMPSTE24O75844 475 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 DXOO77932 396 aaKnown RBP24.41■■□□□ 1.5
USP47-205ENST00000525257 CSF2P04141 144 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 NME1P15531 152 aaKnown RBP24.41■■□□□ 1.5
USP47-205ENST00000525257 L1CAMP32004 1257 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 FLT3P36888 993 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 LSSP48449 732 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 CCNHP51946 323 aaPredicted RBP24.41■■□□□ 1.5
USP47-205ENST00000525257 TMPRSS3P57727 454 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 CFHR1Q03591 330 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 CDKN3Q16667 212 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 CARD16Q5EG05 197 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 PARGQ86W56 976 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 PCDH20Q8N6Y1 951 aaKnown RBP24.41■■□□□ 1.5
USP47-205ENST00000525257 KCNE4Q8WWG9 221 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 C18orf8Q96DM3 657 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 ZDHHC6Q9H6R6 413 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 ZNF212Q9UDV6 495 aa24.41■■□□□ 1.5
USP47-205ENST00000525257 IPO11Q9UI26 975 aaKnown RBP24.41■■□□□ 1.5
USP47-205ENST00000525257 CPED1A4D0V7 1026 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 ERVH48-1M5A8F1 160 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 RABIFP47224 123 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 ARF5P84085 180 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 PDE1CQ14123 709 aaPredicted RBP24.4■■□□□ 1.5
USP47-205ENST00000525257 BECN1Q14457 450 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 TAF1BQ53T94 588 aaPredicted RBP24.4■■□□□ 1.5
USP47-205ENST00000525257 C2CD6Q53TS8 623 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 ARHGAP40Q5TG30 622 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 ZCCHC8Q6NZY4 707 aaKnown RBP24.4■■□□□ 1.5
USP47-205ENST00000525257 ZNF783Q6ZMS7 281 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 FAM131BQ86XD5 332 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 XYLT1Q86Y38 959 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 DRC7Q8IY82 874 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 FAM71AQ8IYT1 594 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 TM6SF2Q9BZW4 377 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 ZYG11BQ9C0D3 744 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 KLF15Q9UIH9 416 aa24.4■■□□□ 1.5
USP47-205ENST00000525257 COL27A1Q8IZC6 1860 aaPredicted RBP24.4■■□□□ 1.5
USP47-205ENST00000525257 GOLGA8SH3BPF8 625 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 TGM2P21980 687 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 GABRB2P47870 512 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 UCNP55089 124 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 BPIFB4P59827 614 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 ERVPABLB-1P60509 514 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 GNA12Q03113 381 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 SLC20A2Q08357 652 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 ISXQ2M1V0 245 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 DEFB133Q30KQ1 61 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 C3orf38Q5JPI3 329 aa24.39■■□□□ 1.49
USP47-205ENST00000525257 TPRG1LQ5T0D9 272 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms