RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 FSCN3Q9NQT6 498 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 UBP1Q9NZI7 540 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 HECAQ9UBI9 543 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SUN2Q9UH99 717 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 LCMT1Q9UIC8 334 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 MBD1Q9UIS9 605 aaPredicted RBP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 GGT7Q9UJ14 662 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 HS3ST2Q9Y278 367 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 ITM2BQ9Y287 266 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 PCDHGC4Q9Y5F7 938 aa4.68□□□□□ -1.66
CHMP4A-202ENST00000524955 IGHV1OR15-9A0A0B4J2B8 117 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MCF2LO15068 1137 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 FANCGO15287 622 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZBTB24O43167 697 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MAP3K13O43283 966 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZSCAN12O43309 604 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RPP40O75818 363 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 NEBLO76041 1014 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 DNTTP04053 509 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 HLA-DQB2P05538 268 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 UGT2B4P06133 528 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CCNB1P14635 433 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RBL1P28749 1068 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MAT2AP31153 395 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 HTR7P34969 479 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SERPINB6P35237 376 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 P2RY2P41231 377 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 PTGER3P43115 390 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MAGEA9P43362 315 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MMP13P45452 471 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RECQLP46063 649 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 DHPSP49366 369 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 TPMTP51580 245 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CLCN6P51797 869 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 EIF3EP60228 445 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 OTUD4Q01804 1114 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RPL6Q02878 288 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SULT2A1Q06520 285 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 IL10RBQ08334 325 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 NIPAL4Q0D2K0 466 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 GALNT2Q10471 571 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CNTN1Q12860 1018 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SIM2Q14190 667 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZNF235Q14590 738 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 IHHQ14623 411 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 NOMO1Q15155 1222 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 PCSK7Q16549 785 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 TAZQ16635 292 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MYLK3Q32MK0 819 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SYCP2LQ5T4T6 812 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SEL1L2Q5TEA6 688 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 TMCO4Q5TGY1 634 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MARC1Q5VT66 337 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZNF776Q68DI1 518 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 LAYNQ6UX15 382 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZNF783Q6ZMS7 281 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 BBS12Q6ZW61 710 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 WDR5BQ86VZ2 330 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 LONP2Q86WA8 852 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RASSF3Q86WH2 238 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZSWIM9Q86XI8 627 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CAMK1DQ8IU85 385 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CCDC13Q8IYE1 715 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 DCLK2Q8N568 766 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RNF10Q8N5U6 811 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 LZTR1Q8N653 840 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 PAF1Q8N7H5 531 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CNTD1Q8N815 330 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 TRIM58Q8NG06 486 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 OR2AP1Q8NGE2 309 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SPATA22Q8NHS9 363 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ACTL9Q8TC94 416 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 COG1Q8WTW3 980 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 PDCD6IPQ8WUM4 868 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 OR8D1Q8WZ84 308 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 SNX19Q92543 992 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 VOPP1Q96AW1 172 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 TOE1Q96GM8 510 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CAPZA3Q96KX2 299 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 KLHL32Q96NJ5 620 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 AGAP3Q96P47 875 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 MYOCQ99972 504 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 HEPHQ9BQS7 1158 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 GPR174Q9BXC1 333 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 AP1M1Q9BXS5 423 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 BRD8Q9H0E9 1235 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RSPH9Q9H1X1 276 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 C6orf106Q9H6K1 298 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 CAAP1Q9H8G2 361 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 NOD2Q9HC29 1040 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RBM22Q9NW64 420 aaKnown RBP eCLIP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 TMEM51Q9NW97 253 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 ZSCAN32Q9NX65 697 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 FBXL12Q9NXK8 326 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 RCOR3Q9P2K3 495 aaPredicted RBP4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 IL36AQ9UHA7 158 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 FBXO4Q9UKT5 387 aa4.67□□□□□ -1.66
CHMP4A-202ENST00000524955 PPM1HQ9ULR3 514 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms