RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ARL6IP4Q66PJ3 421 aaKnown RBP2.78□□□□□ -1.96
PCM1-217ENST00000522998 ANKRD40Q6AI12 368 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 FOXL2NBQ6ZUU3 175 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 EPHX4Q8IUS5 362 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 SYTL1Q8IYJ3 562 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 SPAG16Q8N0X2 631 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 GLIS1Q8NBF1 620 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 PYGO2Q9BRQ0 406 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 DCTN5Q9BTE1 182 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 HIPK3Q9H422 1215 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 DDX43Q9NXZ2 648 aaKnown RBP2.78□□□□□ -1.96
PCM1-217ENST00000522998 DAAM1Q9Y4D1 1078 aa2.78□□□□□ -1.96
PCM1-217ENST00000522998 IGHV4OR15-8A0A075B7B6 117 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 NPIPB11E5RHQ5 1161 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 SYT5O00445 386 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 DHHO43323 396 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 FGF17O60258 216 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 GLP2RO95838 553 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 SRGAP2BP0DMP2 458 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 PECAM1P16284 738 aaPredicted RBP2.77□□□□□ -1.97
PCM1-217ENST00000522998 KCNA5P22460 613 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 CYP2J2P51589 502 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 MYBPC2Q14324 1141 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 STARD3Q14849 445 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 RAB30Q15771 203 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 AAK1Q2M2I8 961 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 XKR9Q5GH70 373 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 TYW3Q6IPR3 259 aaKnown RBP2.77□□□□□ -1.97
PCM1-217ENST00000522998 LYG1Q8N1E2 194 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 ENAHQ8N8S7 591 aaPredicted RBP2.77□□□□□ -1.97
PCM1-217ENST00000522998 C18orf8Q96DM3 657 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 CRB3Q9BUF7 120 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 RBM4Q9BWF3 364 aaKnown RBP2.77□□□□□ -1.97
PCM1-217ENST00000522998 BARHL1Q9BZE3 327 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 CDC23Q9UJX2 597 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 SLC39A10Q9ULF5 831 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 LRCH1Q9Y2L9 728 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 DTNAQ9Y4J8 743 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 CEP83Q9Y592 693 aa2.77□□□□□ -1.97
PCM1-217ENST00000522998 TCRBV7S3A2A0A539 114 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 M0QYT0 321 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 FFAR2O15552 330 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 ZNF500O60304 480 aaPredicted RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 TMCC1O94876 653 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 PEPDP12955 493 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 ENO3P13929 434 aaPredicted RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 ZBTB16Q05516 673 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 GALNT1Q10472 559 aaPredicted RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 CTTNQ14247 550 aaKnown RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 FAM83BQ5T0W9 1011 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 C10orf62Q5T681 223 aaPredicted RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 PGBD2Q6P3X8 592 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 FBXO38Q6PIJ6 1188 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 C1orf228Q6PIY5 440 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 ANKS1BQ7Z6G8 1248 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 MYLK4Q86YV6 388 aaPredicted RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 PGBD5Q8N414 524 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 FAM71BQ8TC56 605 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 TAS1R2Q8TE23 839 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 POF1BQ8WVV4 589 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 ZNF385AQ96PM9 386 aaKnown RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 MOV10L1Q9BXT6 1211 aaKnown RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.76□□□□□ -1.97
PCM1-217ENST00000522998 ZNF334Q9HCZ1 680 aaPredicted RBP2.76□□□□□ -1.97
PCM1-217ENST00000522998 FSCN3Q9NQT6 498 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 ARL15Q9NXU5 204 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 SLC45A1Q9Y2W3 748 aa2.76□□□□□ -1.97
PCM1-217ENST00000522998 CYP3A7-CYP3A51PA0A087WV96 503 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 A0A1W2PNU3 283 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 DYTNA2CJ06 578 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 KDM4EB2RXH2 506 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 F5H423 210 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 J3KTA2 159 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 IFRD1O00458 451 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 HSPB6O14558 160 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 PCDH17O14917 1159 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 SKAP2O75563 359 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 NTSR2O95665 410 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 ATP1A1P05023 1023 aaKnown RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 NPPBP16860 134 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 CYP3A7P24462 503 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 PDIA3P30101 505 aaKnown RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 GRK5P34947 590 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 ZNF132P52740 706 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 FOXL2P58012 376 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 ICA1Q05084 483 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 FOXO1Q12778 655 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 CHAF1AQ13111 956 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 PKP1Q13835 747 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 PTK2BQ14289 1009 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 SPARCL1Q14515 664 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 PUM3Q15397 648 aaKnown RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 ZACNQ401N2 412 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 PLK5Q496M5 336 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 VWA5B1Q5TIE3 1220 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 SLC26A9Q7LBE3 791 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 ZNF527Q8NB42 609 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 RFWD2Q8NHY2 731 aa2.75□□□□□ -1.97
PCM1-217ENST00000522998 FAM110DQ8TAY7 271 aaPredicted RBP2.75□□□□□ -1.97
PCM1-217ENST00000522998 IPO4Q8TEX9 1081 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms