RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TIMM44O43615 452 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 PHF2O75151 1096 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ALDH1A2O94788 518 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 MT-CO1P00395 513 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 COILP38432 576 aaPredicted RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 NBL1P41271 181 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 STK19P49842 368 aaPredicted RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 CLCN6P51797 869 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ECT2LQ008S8 904 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 SULT2A1Q06520 285 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ZNF33AQ06730 810 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 BYSLQ13895 437 aaKnown RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 EIF4HQ15056 248 aaKnown RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 SERPINA13PQ6UXR4 307 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ZNF366Q8N895 744 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 KCNV2Q8TDN2 545 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 MAML1Q92585 1016 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 FATE1Q969F0 183 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 RPL10LQ96L21 214 aaKnown RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 MRGPRX3Q96LB0 322 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 L2HGDHQ9H9P8 463 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 USP29Q9HBJ7 922 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 RRAGDQ9NQL2 400 aaPredicted RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 SEPT10Q9P0V9 454 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 THAP10Q9P2Z0 257 aaPredicted RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 UBA2Q9UBT2 640 aaPredicted RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 PLA2G4CQ9UP65 541 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ERVW-1Q9UQF0 538 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 DRG1Q9Y295 367 aaKnown RBP12.14□□□□□ -0.47
PVT1-215ENST00000522963 STARD13Q9Y3M8 1113 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 STON1Q9Y6Q2 735 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 SPAG17Q6Q759 2223 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
PVT1-215ENST00000522963 ZSCAN5CA6NGD5 496 aaPredicted RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 K7ERQ8 282 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 HRO43593 1189 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 SYNCRIPO60506 623 aaKnown RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 ASLP04424 464 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 ATP5BP06576 529 aaKnown RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 ITGAVP06756 1048 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 EPHX1P07099 455 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 DLDP09622 509 aaKnown RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 SRCP12931 536 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 HLA-EP13747 358 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 IL12RB1P42701 662 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 SLC10A7Q0GE19 358 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 WASHC5Q12768 1159 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 SIM2Q14190 667 aaPredicted RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 ZNF234Q14588 700 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 STARD3Q14849 445 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 CYTH1Q15438 398 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 PTPRNQ16849 979 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 TMCO4Q5TGY1 634 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 TIGD7Q6NT04 549 aaPredicted RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 RETSATQ6NUM9 610 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 KIAA1211LQ6NV74 962 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 WDR5BQ86VZ2 330 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 KLHL7Q8IXQ5 586 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 FAM71DQ8N9W8 422 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 ZBTB44Q8NCP5 570 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 MDGA1Q8NFP4 955 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 HTR3CQ8WXA8 447 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 MYO19Q96H55 970 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 ZNF419Q96HQ0 510 aaPredicted RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 ZNF599Q96NL3 588 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 HINFPQ9BQA5 517 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 TMEM121Q9BTD3 319 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 CARD6Q9BX69 1037 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 DDX47Q9H0S4 455 aaKnown RBP12.13□□□□□ -0.47
PVT1-215ENST00000522963 SLCO3A1Q9UIG8 710 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 SLC25A13Q9UJS0 675 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 RAB23Q9ULC3 237 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 ZNF148Q9UQR1 794 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 ABCA7Q8IZY2 2146 aa12.13□□□□□ -0.47
PVT1-215ENST00000522963 CXorf51AA0A1B0GTR3 108 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 CCDC188H7C350 402 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 KCNN4O15554 427 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 SMAD6O43541 496 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 TMCC1O94876 653 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 JCHAINP01591 159 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 SRPRAP08240 638 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 CCNB1P14635 433 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 PRKCHP24723 683 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 PTPN3P26045 913 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 HOXA6P31267 233 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 CHRNA3P32297 505 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 FNTAP49354 379 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 SERPINH1P50454 418 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 GDF10P55107 478 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
PVT1-215ENST00000522963 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
PVT1-215ENST00000522963 IFI35P80217 286 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms