RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CLPTM1LQ96KA5 538 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 BARD1Q99728 777 aaKnown RBP8.41□□□□□ -1.06
HMGB4-204ENST00000522796 TCF25Q9BQ70 676 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 CDADC1Q9BWV3 514 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 ACOXLQ9NUZ1 547 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 KLHL9Q9P2J3 617 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 ZNF229Q9UJW7 825 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 AGO1Q9UL18 857 aaKnown RBP8.41□□□□□ -1.06
HMGB4-204ENST00000522796 MAP3K2Q9Y2U5 619 aa8.41□□□□□ -1.06
HMGB4-204ENST00000522796 CEP170BQ9Y4F5 1589 aaPredicted RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 A0A1B0GUL6 1792 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 BTNL10A8MVZ5 291 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 KIAA0391O15091 583 aaKnown RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 NUPL2O15504 423 aaKnown RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 PRPF4O43172 522 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 FZD6O60353 706 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 SPAG6O75602 509 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 KRT37O76014 449 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ITGA4P13612 1032 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ZNF182P17025 639 aaPredicted RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ARF4P18085 180 aaPredicted RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 SLC9A1P19634 815 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 NCF2P19878 526 aaPredicted RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 OPRL1P41146 370 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 CASP9P55211 416 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ABRQ12979 859 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 RIN1Q13671 783 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 HADHQ16836 314 aaKnown RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 AASDHQ4L235 1098 aaPredicted RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 C6orf52Q5T4I8 152 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 KRT79Q5XKE5 535 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 RETSATQ6NUM9 610 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 SLC22A16Q86VW1 577 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 FAM26EQ8N5C1 309 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 OR6F1Q8NGZ6 308 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 MCOLN3Q8TDD5 553 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 PDXPQ96GD0 296 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ERGIC2Q96RQ1 377 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 CNPY3Q9BT09 278 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 FRMD8P1Q9BZ68 369 aaPredicted RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ZC3H12CQ9C0D7 883 aaKnown RBP8.4□□□□□ -1.06
HMGB4-204ENST00000522796 NAPBQ9H115 298 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 PPA2Q9H2U2 334 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 C12orf49Q9H741 205 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 JMJD4Q9H9V9 463 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 AKIP1Q9NQ31 210 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 IFT46Q9NQC8 304 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ANLNQ9NQW6 1124 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 CNNM1Q9NRU3 951 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 PSMD13Q9UNM6 376 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 ABCC1P33527 1531 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 STK36Q9NRP7 1315 aa8.4□□□□□ -1.06
HMGB4-204ENST00000522796 SERTM1A2A2V5 107 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF487B1APH4 448 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 CYP26A1O43174 497 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 ZNF623O75123 536 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 ERBB2P04626 1255 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 ACAA1P09110 424 aaPredicted RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 HOXB8P17481 243 aaPredicted RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 KELP23276 732 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 ETV5P41161 510 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 TSPAN5P62079 268 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 IFITM3Q01628 133 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 MGAT3Q09327 533 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 BNIP2Q12982 314 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 TRIM25Q14258 630 aaKnown RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 TBCCQ15814 346 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 IQCCQ4KMZ1 466 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 CDKL4Q5MAI5 379 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 ATAD3CQ5T2N8 411 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 UBAP2Q5T6F2 1119 aaKnown RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 PIK3R6Q5UE93 754 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 RRAGBQ5VZM2 374 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 KIAA0408Q6ZU52 694 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 STXBP4Q6ZWJ1 553 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 NRSN1Q8IZ57 195 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 SIX6OS1Q8N1H7 587 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 METTL6Q8TCB7 284 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 KLHL6Q8WZ60 621 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 SMG7Q92540 1137 aaKnown RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 MCRS1Q96EZ8 462 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 RIPOR3Q96MK2 946 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 TRAF4Q9BUZ4 470 aaPredicted RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 SLC6A15Q9H2J7 730 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 DDX28Q9NUL7 540 aaKnown RBP8.4□□□□□ -1.07
HMGB4-204ENST00000522796 GRHL1Q9NZI5 618 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 HCN2Q9UL51 889 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 RNF11Q9Y3C5 154 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 PCDHB3Q9Y5E6 796 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 PTCH2Q9Y6C5 1203 aa8.4□□□□□ -1.07
HMGB4-204ENST00000522796 TRBV23OR9-2A0A075B6M9 112 aa8.39□□□□□ -1.07
HMGB4-204ENST00000522796 ISPDA4D126 451 aa8.39□□□□□ -1.07
HMGB4-204ENST00000522796 J3KRW8 73 aa8.39□□□□□ -1.07
HMGB4-204ENST00000522796 FPGTO14772 594 aa8.39□□□□□ -1.07
HMGB4-204ENST00000522796 GNB5O14775 395 aa8.39□□□□□ -1.07
HMGB4-204ENST00000522796 RRP8O43159 456 aaKnown RBP8.39□□□□□ -1.07
HMGB4-204ENST00000522796 GMDSO60547 372 aa8.39□□□□□ -1.07
HMGB4-204ENST00000522796 GOT2P00505 430 aaKnown RBP8.39□□□□□ -1.07
HMGB4-204ENST00000522796 PLGP00747 810 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms