RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 E9PBE3 544 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 AP3B1O00203 1094 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 NVLO15381 856 aaKnown RBP10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 ZBTB14O43829 449 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 KLHL41O60662 606 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CD1EP15812 388 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 ATP6V1C1P21283 382 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 NKX3-2P78367 333 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 AFMIDQ63HM1 303 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 LRRC74BQ6ZQY2 392 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 LZTR1Q8N653 840 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 RTL3Q8N8U3 475 aaKnown RBP10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TDRD5Q8NAT2 981 aaKnown RBP10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 KLHDC9Q8NEP7 349 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 DNAJC9Q8WXX5 260 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 MRGPRX2Q96LB1 330 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 OR52B2Q96RD2 323 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TLK1Q9UKI8 766 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TCAF1Q9Y4C2 921 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
RAB11FIP1-204ENST00000522774 FAM155AB1AL88 458 aaPredicted RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TMEM114B3SHH9 223 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 DCXO43602 365 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 ZMPSTE24O75844 475 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 SORBS2O94875 1100 aaKnown RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 GCKP35557 465 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 SLC1A2P43004 574 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 COPAP53621 1224 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 GEMP55040 296 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 FCGRTP55899 365 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CNGA3Q16281 694 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 PCSK7Q16549 785 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 MUM1Q2TAK8 710 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 ZYG11AQ6WRX3 759 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CNTN4Q8IWV2 1026 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CFAP61Q8NHU2 1237 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 PPP1R36Q96LQ0 422 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 FAM96AQ9H5X1 160 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 NSMCE4AQ9NXX6 385 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 RUVBL2Q9Y230 463 aaKnown RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 LOC100653049A0A140TA62 436 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 F8W8V4 182 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CIB2O75838 187 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 KRT34O76011 436 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 ELNP15502 786 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 DNAJB2P25686 324 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 GRK4P32298 578 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 INHBEP58166 350 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 ACTR3P61158 418 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 USP46P62068 366 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 DLG1Q12959 904 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 SEPT6Q14141 434 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TRMT5Q32P41 509 aaKnown RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CFAP157Q5JU67 520 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 CLLU1OSQ5K130 101 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 TFAP2DQ7Z6R9 452 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 FSTL5Q8N475 847 aaPredicted RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 PPHLN1Q8NEY8 458 aaKnown RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 GPR152Q8TDT2 470 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 SCG3Q8WXD2 468 aaKnown RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 SCYL1Q96KG9 808 aa10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 IPO11Q9UI26 975 aaKnown RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 PRG3Q9Y2Y8 225 aaPredicted RBP10.9□□□□□ -0.66
RAB11FIP1-204ENST00000522774 GOLGA8QA0A0J9YX86 632 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 GOLGA8OA6NCC3 632 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 GOLGA8NF8WBI6 632 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 AURKAO14965 403 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 RPLP2P05387 115 aaKnown RBP10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MYL4P12829 197 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 GRIA4P48058 902 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MLLT6P55198 1093 aaPredicted RBP10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 C1orf146Q5VVC0 180 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ZNF280DQ6N043 979 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 MYLK4Q86YV6 388 aaPredicted RBP10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TTC9BQ8N6N2 239 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PNPLA1Q8N8W4 532 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 LINC01599Q8WXQ3 324 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 FSD1LQ9BXM9 530 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 WDR55Q9H6Y2 383 aaPredicted RBP10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 GEMIN8Q9NWZ8 242 aaKnown RBP10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 DNAJB4Q9UDY4 337 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ANKRD6Q9Y2G4 727 aa10.9□□□□□ -0.67
RAB11FIP1-204ENST00000522774 FAM95CA0A1B0GW59 222 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 TARM1B6A8C7 271 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PEX11BO96011 259 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ACADSP16219 412 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 HTR7P34969 479 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 HADHAP40939 763 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 LIPMQ5VYY2 423 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 ANO7Q6IWH7 933 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 RANBP10Q6VN20 620 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 FRMD7Q6ZUT3 714 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 KBTBD2Q8IY47 623 aa10.89□□□□□ -0.67
RAB11FIP1-204ENST00000522774 STYXQ8WUJ0 223 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms