RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 SGK1O00141 431 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 MUSKO15146 869 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 NEBLO76041 1014 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 PDGFBP01127 241 aaPredicted RBP24.55■■□□□ 1.52
PVT1-212ENST00000521951 RHOAP61586 193 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 Q6ZS52 159 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 TRMT11Q7Z4G4 463 aaKnown RBP24.55■■□□□ 1.52
PVT1-212ENST00000521951 KLHL7Q8IXQ5 586 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 CCDC105Q8IYK2 499 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 PCDH20Q8N6Y1 951 aaKnown RBP24.55■■□□□ 1.52
PVT1-212ENST00000521951 TXNDC5Q8NBS9 432 aaKnown RBP24.55■■□□□ 1.52
PVT1-212ENST00000521951 FLCNQ8NFG4 579 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 CCDC114Q96M63 670 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 VAT1Q99536 393 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 TNKS2Q9H2K2 1166 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 AMACRQ9UHK6 382 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 ATP8A1Q9Y2Q0 1164 aa24.55■■□□□ 1.52
PVT1-212ENST00000521951 HLA-DQB2P05538 268 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 C2orf54Q08AI8 447 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 HNRNPA1L2Q32P51 320 aaKnown RBP24.54■■□□□ 1.52
PVT1-212ENST00000521951 SDE2Q6IQ49 451 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 PKN3Q6P5Z2 889 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 Q6ZVU0 165 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 ZNF567Q8N184 647 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 PTPRN2Q92932 1015 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 CLDN23Q96B33 292 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 RTP4Q96DX8 246 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 TEKT5Q96M29 485 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 AGAP3Q96P47 875 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 TM6SF2Q9BZW4 377 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 SUN2Q9UH99 717 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 SIT1Q9Y3P8 196 aa24.54■■□□□ 1.52
PVT1-212ENST00000521951 C5orf60A6NFR6 353 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 ADAM23O75077 832 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 STK10O94804 968 aaKnown RBP24.53■■□□□ 1.52
PVT1-212ENST00000521951 EPHX1P07099 455 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 RGRP47804 291 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 MAXP61244 160 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 LMNB2Q03252 620 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 HSF5Q4G112 596 aaPredicted RBP24.53■■□□□ 1.52
PVT1-212ENST00000521951 ATXN7L2Q5T6C5 722 aaPredicted RBP24.53■■□□□ 1.52
PVT1-212ENST00000521951 GSTA5Q7RTV2 222 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 PID1Q7Z2X4 250 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 EXOC2Q96KP1 924 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 GABRG3Q99928 467 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 L2HGDHQ9H9P8 463 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 KLHL8Q9P2G9 620 aaPredicted RBP24.53■■□□□ 1.52
PVT1-212ENST00000521951 PCYOX1Q9UHG3 505 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 TRHDEQ9UKU6 1024 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 A0A0C4DFX4 3053 aa24.53■■□□□ 1.52
PVT1-212ENST00000521951 EDDM13A0A1B0GTR0 161 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 TMEM221A6NGB7 291 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 M0R296 226 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 ZBTB24O43167 697 aaPredicted RBP24.52■■□□□ 1.52
PVT1-212ENST00000521951 GCATO75600 419 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 IFNB1P01574 187 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 HSPA9P38646 679 aaKnown RBP24.52■■□□□ 1.52
PVT1-212ENST00000521951 NSUN2Q08J23 767 aaKnown RBP eCLIP24.52■■□□□ 1.52
PVT1-212ENST00000521951 CARD16Q5EG05 197 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 ANKRD20A2Q5SQ80 823 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 ANKRD20A1Q5TYW2 823 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 ANKRD20A3Q5VUR7 823 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 GLIS1Q8NBF1 620 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 MNS1Q8NEH6 495 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 CCDC110Q8TBZ0 833 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 KRT12Q99456 494 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 MGME1Q9BQP7 344 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 TTLL3Q9Y4R7 772 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 CKAP5Q14008 2032 aa24.52■■□□□ 1.52
PVT1-212ENST00000521951 TARSL2A2RTX5 802 aaKnown RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 BNIP3LO60238 219 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 GSRP00390 522 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 ETS1P14921 441 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 CD68P34810 354 aaPredicted RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 SNRPD1P62314 119 aaKnown RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 ITKQ08881 620 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 GAS6Q14393 721 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 C9orf64Q5T6V5 341 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 CWF19L1Q69YN2 538 aaKnown RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 PRUNE1Q86TP1 453 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 PLPP6Q8IY26 295 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 OR2AP1Q8NGE2 309 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 OR2A12Q8NGT7 310 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 SPATA13Q96N96 652 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 PRSS16Q9NQE7 514 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 FEZ2Q9UHY8 353 aaPredicted RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 MMP17Q9ULZ9 603 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 TTC24A2A3L6 582 aaPredicted RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 CHURC1-FNTBB4DL54 471 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 SIN3BO75182 1162 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 IGSF6O95976 241 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 CR2P20023 1033 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 KCTD19Q17RG1 926 aaPredicted RBP24.51■■□□□ 1.51
PVT1-212ENST00000521951 EOGTQ5NDL2 527 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 DPY19L3Q6ZPD9 716 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 CEP112Q8N8E3 955 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 GRK7Q8WTQ7 553 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 GDAP1L1Q96MZ0 367 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 CARD6Q9BX69 1037 aa24.51■■□□□ 1.51
PVT1-212ENST00000521951 POLR1EQ9GZS1 481 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms