RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CACNA1AO00555 2505 aa21.03■□□□□ 0.96
TRIM35-203ENST00000521253 C4orf47A7E2U8 309 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 C10orf142B7Z368 130 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 H3BRJ5 948 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 BCAT2O15382 392 aaPredicted RBP21.02■□□□□ 0.96
TRIM35-203ENST00000521253 SLC7A4O43246 635 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 LEFTY1O75610 366 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 TMCC1O94876 653 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 PROSCO94903 275 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 SSR1P43307 286 aaKnown RBP21.02■□□□□ 0.96
TRIM35-203ENST00000521253 MAPK8P45983 427 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 POLNQ7Z5Q5 900 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 NPWQ8N729 165 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 NETO2Q8NC67 525 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 ARRDC3Q96B67 414 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 HEPHQ9BQS7 1158 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 ORAI3Q9BRQ5 295 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 SLC39A8Q9C0K1 460 aa21.02■□□□□ 0.96
TRIM35-203ENST00000521253 DCDC2BA2VCK2 349 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 ARHGAP33O14559 1287 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 PLRG1O43660 514 aaKnown RBP21.01■□□□□ 0.95
TRIM35-203ENST00000521253 CD27P26842 260 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 ARL4AP40617 200 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 PAPOLAP51003 745 aaKnown RBP21.01■□□□□ 0.95
TRIM35-203ENST00000521253 INO80DQ53TQ3 878 aaPredicted RBP21.01■□□□□ 0.95
TRIM35-203ENST00000521253 PIP5KL1Q5T9C9 394 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 AFMIDQ63HM1 303 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 DGLUCYQ7Z3D6 616 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 ARHGAP12Q8IWW6 846 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 PLPP6Q8IY26 295 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 RYBPQ8N488 228 aaPredicted RBP21.01■□□□□ 0.95
TRIM35-203ENST00000521253 OR6K2Q8NGY2 324 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 CASKIN2Q8WXE0 1202 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 CSPG4P5Q96PW8 444 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 GTPBP2Q9BX10 602 aaKnown RBP21.01■□□□□ 0.95
TRIM35-203ENST00000521253 PCDH18Q9HCL0 1135 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 PI4KAP42356 2102 aa21.01■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3DA0A087WVF3 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3IA0A087WXS9 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3EA0A087X179 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3KA0A087X1G2 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3FA6NER0 549 aaPredicted RBP21■□□□□ 0.95
TRIM35-203ENST00000521253 ARHGAP42A6NI28 874 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3LB9A6J9 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 J3KR12 359 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 GSRP00390 522 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3HP0C7X1 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TAS2R38P59533 333 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 PPP2CBP62714 309 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 PPP2CAP67775 309 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 HADHQ16836 314 aaKnown RBP21■□□□□ 0.95
TRIM35-203ENST00000521253 ATXN7L2Q5T6C5 722 aaPredicted RBP21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3GQ6DHY5 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3CQ6IPX1 549 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TBC1D3Q8IZP1 549 aaPredicted RBP21■□□□□ 0.95
TRIM35-203ENST00000521253 OR2AP1Q8NGE2 309 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 SLC35G2Q8TBE7 412 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 KDM4CQ9H3R0 1056 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 ZDHHC6Q9H6R6 413 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 EBF2Q9HAK2 575 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 PDFQ9HBH1 243 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TM9SF3Q9HD45 589 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 DYRK4Q9NR20 520 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 LCMT1Q9UIC8 334 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 MFHAS1Q9Y4C4 1052 aa21■□□□□ 0.95
TRIM35-203ENST00000521253 TM4SF5O14894 197 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 PRAMEF11O60813 436 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 SYPP08247 313 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 AMPD1P23109 780 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 GKP32189 559 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 CCR5P51681 352 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 AFF3P51826 1226 aaKnown RBP20.99■□□□□ 0.95
TRIM35-203ENST00000521253 ATXN3P54252 364 aaPredicted RBP20.99■□□□□ 0.95
TRIM35-203ENST00000521253 TAS2R40P59535 323 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 SNRPD1P62314 119 aaKnown RBP20.99■□□□□ 0.95
TRIM35-203ENST00000521253 GRIK2Q13002 908 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 ERN2Q76MJ5 926 aaKnown RBP20.99■□□□□ 0.95
TRIM35-203ENST00000521253 OR2I1PQ8NGU4 316 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 VOPP1Q96AW1 172 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 PPP1R16AQ96I34 528 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 HDAC8Q9BY41 377 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 ETNK2Q9NVF9 386 aa20.99■□□□□ 0.95
TRIM35-203ENST00000521253 UBA2Q9UBT2 640 aaPredicted RBP20.99■□□□□ 0.95
TRIM35-203ENST00000521253 CACNA1EQ15878 2313 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 A0A1W2PPC4 97 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 TMEM110-MUSTN1A8MSY1 372 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 DFFAO00273 331 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 CD48P09326 243 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 ITGB7P26010 798 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 MAN1A1P33908 653 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 GJC1P36383 396 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 CSNK1EP49674 416 aaKnown RBP20.98■□□□□ 0.95
TRIM35-203ENST00000521253 CDH6P55285 790 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 RHOAP61586 193 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 KRT81Q14533 505 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 CYTH1Q15438 398 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 MYLK3Q32MK0 819 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 ATP13A4Q4VNC1 1196 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 ARHGAP36Q6ZRI8 547 aa20.98■□□□□ 0.95
TRIM35-203ENST00000521253 TP53INP2Q8IXH6 220 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms