RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CUL3Q13618 768 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 GALNT3Q14435 633 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 DSC3Q14574 896 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 MBTPS1Q14703 1052 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 C1orf146Q5VVC0 180 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 PKN3Q6P5Z2 889 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 HAPLN3Q96S86 360 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 UPF3AQ9H1J1 476 aaKnown RBP11.52□□□□□ -0.57
CLK4-206ENST00000520878 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 A0A0G2JMZ2 1700 aa11.52□□□□□ -0.57
CLK4-206ENST00000520878 TRIM13O60858 407 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 CRCPO75575 148 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 USP1O94782 785 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SERPINB5P36952 375 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 ZNF135P52742 658 aaPredicted RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 TEDDM1Q5T9Z0 273 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 COLGALT2Q8IYK4 626 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 KIRREL3Q8IZU9 778 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 OR7D4Q8NG98 312 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SMOC2Q9H3U7 446 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 COPG2Q9UBF2 871 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 FBXO5Q9UKT4 447 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 PRR5-ARHGAP8B1AHC4 643 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 DCXO43602 365 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 CYP11A1P05108 521 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 TSPAN8P19075 237 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 ATP5C1P36542 298 aaKnown RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 ACVRL1P37023 503 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 CD151P48509 253 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SERPINH1P50454 418 aaKnown RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 LIMK2P53671 638 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 ARHGAP8P85298 464 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 MAP3K21Q5TCX8 1036 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 KLC3Q6P597 504 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 HDAC10Q969S8 669 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 CYP2S1Q96SQ9 504 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 FAM167BQ9BTA0 163 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 ACE2Q9BYF1 805 aaPredicted RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 MYO9BQ13459 2157 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 HMX2A2RU54 273 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 OR51F1A6NGY5 319 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 H7C4K7 107 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 AIM2O14862 343 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 MAP2K2P36507 400 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 VEPH1Q14D04 833 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 TAF11Q15544 211 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 PIK3R6Q5UE93 754 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 ACVR1CQ8NER5 493 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 AUTS2Q8WXX7 1259 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 APBB2Q92870 758 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 BTBD10Q9BSF8 475 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 NUF2Q9BZD4 464 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 ILKAPQ9H0C8 392 aaPredicted RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 GPAMQ9HCL2 828 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 CASS4Q9NQ75 786 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 KCNK4Q9NYG8 393 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 MID2Q9UJV3 735 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 SOX13Q9UN79 622 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 HBS1LQ9Y450 684 aaKnown RBP11.51□□□□□ -0.57
CLK4-206ENST00000520878 RAD54BQ9Y620 910 aa11.51□□□□□ -0.57
CLK4-206ENST00000520878 CALB2P22676 271 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 MAGEA6P43360 314 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 ABCE1P61221 599 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 RPS24P62847 133 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 NSUN2Q08J23 767 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLK4-206ENST00000520878 PTPRCAPQ14761 206 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 TDRD5Q8NAT2 981 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 PPFIBP2Q8ND30 876 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 ACMSDQ8TDX5 336 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 BTN2A3PQ96KV6 586 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 PLAC1Q9HBJ0 212 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 TRPM5Q9NZQ8 1165 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 XPR1Q9UBH6 696 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 PIGNO95427 931 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 AHSGP02765 367 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 GRK2P25098 689 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 HOXC8P31273 242 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 MS4A13Q5J8X5 152 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 RASIP1Q5U651 963 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 RGS9BPQ6ZS82 235 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 TAS1R1Q7RTX1 841 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 CARNMT1Q8N4J0 409 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 FBXO22Q8NEZ5 403 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 IGSF8Q969P0 613 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 NXNL1Q96CM4 212 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 CLPTM1LQ96KA5 538 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 MARK4Q96L34 752 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms