RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PIP4P1Q86T03 277 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 MMP21Q8N119 569 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 ZNF548Q8NEK5 533 aaPredicted RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 CLEC4CQ8WTT0 213 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 NCSTNQ92542 709 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 P2RY11Q96G91 374 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 VEZTQ9HBM0 779 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 PAPOLBQ9NRJ5 636 aaKnown RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 ALKBH4Q9NXW9 302 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 ZNF335Q9H4Z2 1342 aaPredicted RBP4.38□□□□□ -1.71
SQLE-204ENST00000520493 KDM3AQ9Y4C1 1321 aa4.38□□□□□ -1.71
SQLE-204ENST00000520493 SLC22A23A1A5C7 686 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 B4DGG1 531 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 DOK2O60496 412 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 TIPRLO75663 272 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 CLEC3BP05452 202 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 VDRP11473 427 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 ARSAP15289 507 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 ST6GAL1P15907 406 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 NDUFS1P28331 727 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 EPHA8P29322 1005 aaPredicted RBP4.37□□□□□ -1.71
SQLE-204ENST00000520493 AGTR2P50052 363 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 CDH15P55291 814 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 LRRC24Q50LG9 513 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 ZNF766Q5HY98 468 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 AADACL2Q6P093 401 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 GALNT7Q86SF2 657 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 ADGRG6Q86SQ4 1221 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 DIS3L2Q8IYB7 885 aaKnown RBP4.37□□□□□ -1.71
SQLE-204ENST00000520493 ADGRF4Q8IZF3 695 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 ADSSL1Q8N142 457 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 RNFT2Q96EX2 444 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 NPLQ9BXD5 320 aaPredicted RBP4.37□□□□□ -1.71
SQLE-204ENST00000520493 FAM234AQ9H0X4 552 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 GHITMQ9H3K2 345 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 ERVK-5Q9HDB9 667 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 KRT84Q9NSB2 600 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 DECR2Q9NUI1 292 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 B3GNT3Q9Y2A9 372 aa4.37□□□□□ -1.71
SQLE-204ENST00000520493 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 IGLV5-39A0A0G2JS06 123 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 NPIPB13A6NJU9 1138 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 NPIPB5A8MRT5 1133 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 NPIPB4C9JG80 1138 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 TNPO2O14787 897 aaKnown RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 ZC3H11AO75152 810 aaKnown RBP eCLIP4.36□□□□□ -1.71
SQLE-204ENST00000520493 CCNDBP1O95273 360 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 RPN1P04843 607 aaKnown RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 ACADMP11310 421 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 UBL4AP11441 157 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 LAMP2P13473 410 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 CYP4B1P13584 511 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 MCCP23508 829 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 PRPH2P23942 346 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 HOXA7P31268 230 aaPredicted RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 GJC1P36383 396 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 ALDH7A1P49419 539 aaKnown RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 ZNF84P51523 738 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 ADPRHP54922 357 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 LINC00205P59089 165 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 ARHGAP8P85298 464 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 MAMLD1Q13495 774 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 CUL4AQ13619 759 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 LEXMQ3ZCV2 418 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 FAM69AQ5T7M9 428 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 GJB7Q6PEY0 223 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 CRELD2Q6UXH1 353 aaPredicted RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 B4GALNT4Q76KP1 1039 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 TFAP2DQ7Z6R9 452 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 CHD1LQ86WJ1 897 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 SCN4BQ8IWT1 228 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 SLC44A5Q8NCS7 719 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 ETNPPLQ8TBG4 499 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 CREB3L4Q8TEY5 395 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 CELF1Q92879 486 aaKnown RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 NSUN4Q96CB9 384 aaKnown RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 NR1H4Q96RI1 486 aaPredicted RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 CLPBQ9H078 707 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 RSPH9Q9H1X1 276 aaPredicted RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 TTC12Q9H892 705 aaPredicted RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 SEMA4BQ9NPR2 832 aaPredicted RBP4.36□□□□□ -1.71
SQLE-204ENST00000520493 PLSCR4Q9NRQ2 329 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 KCND2Q9NZV8 630 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 KLQ9UEF7 1012 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 VPS28Q9UK41 221 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 NAALADL1Q9UQQ1 740 aa4.36□□□□□ -1.71
SQLE-204ENST00000520493 A0A0U1RQG5 324 aaPredicted RBP4.35□□□□□ -1.71
SQLE-204ENST00000520493 TMEM247A6NEH6 219 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 B4DLN1 442 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 PRYO14603 147 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 PRPF4O43172 522 aaKnown RBP eCLIP4.35□□□□□ -1.71
SQLE-204ENST00000520493 PTP4A3O75365 173 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 KAT7O95251 611 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 HLA-DQA2P01906 255 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 ENO1P06733 434 aaKnown RBP4.35□□□□□ -1.71
SQLE-204ENST00000520493 CHRM4P08173 479 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
SQLE-204ENST00000520493 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms