RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TNFRSF8P28908 595 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 ADORA2BP29275 332 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 MAT2AP31153 395 aaKnown RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 SLC6A4P31645 630 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CD70P32970 193 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NOS2P35228 1153 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 DRD3P35462 400 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CSKP41240 450 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 ATP1A2P50993 1020 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CASP5P51878 434 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NEK4P51957 841 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NDST1P52848 882 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 ECT2LQ008S8 904 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 SULT2A1Q06520 285 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 INCA1Q0VD86 236 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 KLRB1Q12918 225 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 BIRC3Q13489 604 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 SLC12A1Q13621 1099 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CDH18Q13634 790 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NCOA4Q13772 614 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CLCA4Q14CN2 919 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 RABEP1Q15276 862 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 IGFBP7Q16270 282 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 SGSM1Q2NKQ1 1148 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 RAB41Q5JT25 222 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CCDC181Q5TID7 509 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 PIK3R6Q5UE93 754 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 AGBL4Q5VU57 503 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 ESRP1Q6NXG1 681 aaKnown RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 GUSBP11Q6P575 273 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 DNAJC14Q6Y2X3 702 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 SCARA5Q6ZMJ2 495 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 RINLQ6ZS11 566 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 SCD5Q86SK9 330 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 DTX1Q86Y01 620 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 PTRH1Q86Y79 214 aaKnown RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 STK40Q8N2I9 435 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 TTC39CQ8N584 583 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 C12orf29Q8N999 325 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 XXYLT1Q8NBI6 393 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 C9orf43Q8TAL5 461 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 RNF139Q8WU17 664 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 OR8D1Q8WZ84 308 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 PTPRN2Q92932 1015 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 DNAJC19Q96DA6 116 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 MOCOSQ96EN8 888 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 MRGPRX3Q96LB0 322 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 ZSCAN31Q96LW9 406 aaPredicted RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 HEXIM2Q96MH2 286 aaKnown RBP5.03□□□□□ -1.6
SDCBP-207ENST00000520168 PPP1R9BQ96SB3 815 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 FAM129BQ96TA1 746 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 MDFIQ99750 246 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CCDC3Q9BQI4 270 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 NT5C1AQ9BXI3 368 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 IMPG2Q9BZV3 1241 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 EPB41L5Q9HCM4 733 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 TPSG1Q9NRR2 321 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 GPR27Q9NS67 375 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 FAM49BQ9NUQ9 324 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 FAM13BQ9NYF5 915 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CHMP5Q9NZZ3 219 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 VPS4AQ9UN37 437 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CEP83Q9Y592 693 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 HS3ST3A1Q9Y663 406 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 MED13Q9UHV7 2174 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 UNC13CQ8NB66 2214 aa5.03□□□□□ -1.6
SDCBP-207ENST00000520168 CHD5Q8TDI0 1954 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 SPTY2D1-AS1A0A0U1RR47 76 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 VPS37CA5D8V6 355 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 ADARB2-AS1A8MUL3 147 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 D6RAR5 112 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 DYRK3O43781 588 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 TBL1XO60907 577 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 RTN2O75298 545 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 ZRANB2O95218 330 aaKnown RBP eCLIP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 RECQLP46063 649 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 RABIFP47224 123 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 CLDN10P78369 228 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 SEPT6Q14141 434 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 FGL2Q14314 439 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 TGIF1Q15583 401 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 NFKBIBQ15653 356 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 FOXD4L6Q3SYB3 417 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 LACTB2Q53H82 288 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 PITRM1Q5JRX3 1037 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 ARTNQ5T4W7 220 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 MCTP1Q6DN14 999 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 PM20D1Q6GTS8 502 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 KIAA1161Q6NSJ0 714 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 FOXD4L3Q6VB84 417 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 KYAT3Q6YP21 454 aaKnown RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 PTAR1Q7Z6K3 402 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-207ENST00000520168 SYT9Q86SS6 491 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 HEATR4Q86WZ0 1026 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 HORMAD1Q86X24 394 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 C12orf56Q8IXR9 622 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 CCDC65Q8IXS2 484 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 SLC22A18ASQ8N1D0 253 aa5.02□□□□□ -1.61
SDCBP-207ENST00000520168 SDR16C5Q8N3Y7 309 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms