RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 LHX3Q9UBR4 397 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 SERGEFQ9UGK8 458 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 AMACRQ9UHK6 382 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 EFR3BQ9Y2G0 817 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-212ENST00000519661 ALG6Q9Y672 507 aa11.73□□□□□ -0.53
SPIDR-212ENST00000519661 GOLGA6L6A8MZA4 724 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 POP4O95707 220 aaKnown RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 SEMA4FO95754 770 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 CR2P20023 1033 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 ACSL1P33121 698 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 PTPN7P35236 360 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 HSPA9P38646 679 aaKnown RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 PAPOLAP51003 745 aaKnown RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 SUOXP51687 545 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 CCNHP51946 323 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 ADPRHP54922 357 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 TAS2R38P59533 333 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 SNRPD1P62314 119 aaKnown RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 RPL6Q02878 288 aaKnown RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 LMNB2Q03252 620 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 CCDC15Q0P6D6 951 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 MESDQ14696 234 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 CYTH1Q15438 398 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 ATP13A4Q4VNC1 1196 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 ANKRD20A8PQ5CZ79 823 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 NCBP2-AS2Q69YL0 99 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 OR2T34Q8NGX1 318 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 CEP76Q8TAP6 659 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 PIP4K2CQ8TBX8 421 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 RAPGEF5Q92565 580 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 MAML1Q92585 1016 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 HSPH1Q92598 858 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 GDAP1L1Q96MZ0 367 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 OLFM3Q96PB7 478 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 RNF157Q96PX1 679 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 TUBGCP5Q96RT8 1024 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 FBXL12Q9NXK8 326 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 SUSD2Q9UGT4 822 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 IL36AQ9UHA7 158 aa11.72□□□□□ -0.53
SPIDR-212ENST00000519661 IPO11Q9UI26 975 aaKnown RBP11.72□□□□□ -0.53
SPIDR-212ENST00000519661 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 PRR5-ARHGAP8B1AHC4 643 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 J3KR12 359 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 AREL1O15033 823 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 DAPK3O43293 454 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 IGHV4-34P06331 123 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 COMTP21964 271 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 AMPD1P23109 780 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 CTNNA1P35221 906 aaKnown RBP11.71□□□□□ -0.53
SPIDR-212ENST00000519661 CDKN2BP42772 138 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 MAPK8P45983 427 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 ARHGAP8P85298 464 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 HNRNPDQ14103 355 aaKnown RBP11.71□□□□□ -0.53
SPIDR-212ENST00000519661 PPP2R5EQ16537 467 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 MYLK3Q32MK0 819 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 WDR45BQ5MNZ6 344 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 SYCP2LQ5T4T6 812 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 CYP2U1Q7Z449 544 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 TMEFF1Q8IYR6 380 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.53
SPIDR-212ENST00000519661 PLD5Q8N7P1 536 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 CHST14Q8NCH0 376 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 ASB12Q8WXK4 309 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 RAB7BQ96AH8 199 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 HDAC11Q96DB2 347 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 ECHDC3Q96DC8 303 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 PPP1R16AQ96I34 528 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 HSPA12BQ96MM6 686 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 ZNF641Q96N77 438 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-212ENST00000519661 MGME1Q9BQP7 344 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 NEUROG2Q9H2A3 272 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 GRPEL1Q9HAV7 217 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 UBA2Q9UBT2 640 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-212ENST00000519661 NCKAP1Q9Y2A7 1128 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 FCF1Q9Y324 198 aaKnown RBP11.71□□□□□ -0.53
SPIDR-212ENST00000519661 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 LAMA1P25391 3075 aa11.71□□□□□ -0.53
SPIDR-212ENST00000519661 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.54
SPIDR-212ENST00000519661 A0A1W2PP55 124 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 MAP3K13O43283 966 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 BUB1O43683 1085 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 LEFTY1O75610 366 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 IL1BP01584 269 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 SERPINF2P08697 491 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 MX2P20592 715 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 CCNCP24863 283 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 CTNNA2P26232 953 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 CD27P26842 260 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 GARSP41250 739 aaKnown RBP11.7□□□□□ -0.54
SPIDR-212ENST00000519661 RECQLP46063 649 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-212ENST00000519661 PSMD8P48556 350 aa11.7□□□□□ -0.54
SPIDR-212ENST00000519661 PEX5P50542 639 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms