RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 RGRP47804 291 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 LBRQ14739 615 aaKnown RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 TPGS2Q68CL5 300 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 ZNF470Q6ECI4 717 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 DRICH1Q6PGQ1 229 aaPredicted RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 SEC14L1Q92503 715 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 TBL1YQ9BQ87 522 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 SEZ6LQ9BYH1 1024 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 OSBPL2Q9H1P3 480 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 NOD2Q9HC29 1040 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 RABGEF1Q9UJ41 708 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 H3BQ06 376 aaPredicted RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 MUSKO15146 869 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 CHADO15335 359 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 SMAD6O43541 496 aaKnown RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 PDHA1P08559 390 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 RFC2P35250 354 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 ERFP50548 548 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 PPIDQ08752 370 aaKnown RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 PAFAH1B3Q15102 231 aaKnown RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 LY6G5CQ5SRR4 150 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 ARMC12Q5T9G4 340 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 NAPEPLDQ6IQ20 393 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 TCP10LQ8TDR4 215 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 ZNF689Q96CS4 500 aaPredicted RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 XAB2Q9HCS7 855 aaKnown RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 DNMT3BQ9UBC3 853 aaKnown RBP9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 ARL5AQ9Y689 179 aa9.9□□□□□ -0.82
EFCAB13-203ENST00000517484 THSD7BQ9C0I4 1608 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 LEFTY2O00292 366 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 MATN3O15232 486 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 FGF10O15520 208 aaPredicted RBP9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 ALPIP09923 528 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 PLK1P53350 603 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 MPP1Q00013 466 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 NIPAL4Q0D2K0 466 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 USP10Q14694 798 aaKnown RBP9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 LRIG3Q6UXM1 1119 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 MREGQ8N565 214 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 PDZD8Q8NEN9 1154 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 HDAC10Q969S8 669 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 FCRL3Q96P31 734 aaPredicted RBP9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 ARHGEF38Q9NXL2 777 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 MSRAQ9UJ68 235 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 PRDM4Q9UKN5 801 aa9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 YBX2Q9Y2T7 364 aaKnown RBP9.9□□□□□ -0.83
EFCAB13-203ENST00000517484 NCAM2O15394 837 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ABLIM3O94929 683 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 SERPINF2P08697 491 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 KCNA4P22459 653 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ATP5DP30049 168 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 KDSRQ06136 332 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 GALNT2Q10471 571 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 CRYMQ14894 314 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ARHGAP15Q53QZ3 475 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 FAM133BQ5BKY9 247 aaKnown RBP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 LGSNQ5TDP6 509 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 LRRC34Q8IZ02 419 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 OR13C4Q8NGS5 318 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 CABS1Q96KC9 395 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 TBATAQ96M53 351 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 TGS1Q96RS0 853 aaKnown RBP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 OMDQ99983 421 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 GPR63Q9BZJ6 419 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 UBXN6Q9BZV1 441 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ZBP1Q9H171 429 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 NOL6Q9H6R4 1146 aaKnown RBP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ZDHHC6Q9H6R6 413 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ZNF395Q9H8N7 513 aaPredicted RBP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 IQANK1A0A1B0GTG1 560 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 HACD1B0YJ81 288 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 NEMP1O14524 444 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ANXA9O76027 345 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 PIGNO95427 931 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 PTPN2P17706 415 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 RPL34P49207 117 aaKnown RBP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 CDH17Q12864 832 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 XRCC4Q13426 336 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ZRANB3Q5FWF4 1079 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 NAIF1Q69YI7 327 aaPredicted RBP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 GANCQ8TET4 914 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 SLCO2A1Q92959 643 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 ASIC4Q96FT7 647 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 SIGLEC10Q96LC7 697 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 CLDND1Q9NY35 253 aa9.89□□□□□ -0.83
EFCAB13-203ENST00000517484 A0A0G2JND7 137 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 WASH3PC4AMC7 463 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 XPAP23025 273 aaPredicted RBP9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 CD70P32970 193 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 PTPN7P35236 360 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 ZBTB16Q05516 673 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 TSTA3Q13630 321 aaPredicted RBP9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 TAZQ16635 292 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 KCNMB4Q86W47 210 aa9.88□□□□□ -0.83
EFCAB13-203ENST00000517484 CRIPAKQ8N1N5 446 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms