RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 PIGNO95427 931 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CLDN14O95500 239 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DUS4LO95620 317 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CAVIN2O95810 425 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CH25HO95992 272 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 THY1P04216 161 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C6orf222P0C671 652 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ATXN1LP0C7T5 689 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CYP2C9P11712 490 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CDH1P12830 882 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 AKR1A1P14550 325 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CREB1P16220 341 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC9A1P19634 815 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FMO4P31512 558 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SOX9P48436 509 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 METAP2P50579 478 aaKnown RBP eCLIP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BCAT1P54687 386 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MANFP55145 182 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TBX4P57082 545 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 WDR5P61964 334 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PPIAP62937 165 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TNFRSF9Q07011 255 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MLC1Q15049 377 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NECTIN1Q15223 517 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LY6KQ17RY6 165 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 COL28A1Q2UY09 1125 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ENTPD8Q5MY95 495 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FFAR4Q5NUL3 377 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM69BQ5VUD6 431 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IRAK1BP1Q5VVH5 260 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GALNT17Q6IS24 598 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM122CQ6P4D5 195 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IL27RAQ6UWB1 636 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LAYNQ6UX15 382 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC25A42Q86VD7 318 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NT5DC4Q86YG4 428 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HERC6Q8IVU3 1022 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DENND6AQ8IWF6 608 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CHERPQ8IWX8 916 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LAS2Q8IYD9 372 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C17orf53Q8N3J3 647 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RNF175Q8N4F7 328 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC25A41Q8N5S1 370 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYCT1Q8N699 235 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF611Q8N823 705 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM47BQ8NA70 645 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RELL2Q8NC24 303 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CHST14Q8NCH0 376 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NGDNQ8NEJ9 315 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MIPOL1Q8TD10 442 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CCHCR1Q8TD31 782 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FCAMRQ8WWV6 532 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 STAMBPL1Q96FJ0 436 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SCRN2Q96FV2 425 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF496Q96IT1 587 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SHDQ96IW2 340 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ST6GAL2Q96JF0 529 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LZTS2Q9BRK4 669 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RNF26Q9BY78 433 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 STK33Q9BYT3 514 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SLC25A39Q9BZJ4 359 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TANGO6Q9C0B7 1094 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMX4Q9H1E5 349 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TP63Q9H3D4 680 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KCTD10Q9H3F6 313 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TFB2MQ9H5Q4 396 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PLEKHA5Q9HAU0 1116 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GPR35Q9HC97 309 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PNRC2Q9NPJ4 139 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FSCN3Q9NQT6 498 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CNNM1Q9NRU3 951 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TOMM22Q9NS69 142 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 STAU2Q9NUL3 570 aaKnown RBP eCLIP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NUDT4Q9NZJ9 180 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PARP2Q9UGN5 583 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 AFF4Q9UHB7 1163 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SCOCQ9UIL1 159 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MSRAQ9UJ68 235 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SNX14Q9Y5W7 946 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RFNGQ9Y644 331 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ASTN1O14525 1302 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYBBP1AQ9BQG0 1328 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HMCN2Q8NDA2 5059 aa-0.68□□□□□ -2.52
RNU6-1238P-201ENST00000517215 NAV3Q8IVL0 2385 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 A0A1W2PQ72 361 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IQCA1LA6NCM1 817 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SH2D7A6NKC9 451 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KCNJ18B7U540 433 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 E7ENQ6 273 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KLF11O14901 512 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TGFB1I1O43294 461 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PRAMEF2O60811 474 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RECKO95980 971 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HOXB7P09629 217 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PLA2G4BP0C869 781 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MMP9P14780 707 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF14P17017 642 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GIFP27352 417 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ADORA2AP29274 412 aa-0.69□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SSTR2P30874 369 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms