RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PFKFB4Q16877 469 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GALNTL6Q49A17 601 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DCAF6Q58WW2 860 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RUNDC3AQ59EK9 446 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RETSATQ6NUM9 610 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NEK10Q6ZWH5 1172 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PATL1Q86TB9 770 aaKnown RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TMPRSS12Q86WS5 348 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RBFAQ8N0V3 343 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 C2CD4CQ8TF44 421 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TMEM18Q96B42 140 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ELAC2Q9BQ52 826 aaKnown RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ACAD9Q9H845 621 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 AGO1Q9UL18 857 aaKnown RBP3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LZTS1Q9Y250 596 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RAI2Q9Y5P3 530 aa3.01□□□□□ -1.93
RNU6-1088P-201ENST00000516850 A0A087WYN8 130 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SAA2-SAA4A0A096LPE2 208 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CLDN7O95471 211 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IL1AP01583 271 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IFIT2P09913 472 aaKnown RBP3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DHRS4L1P0CG22 281 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CHN1P15882 459 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RPL3P39023 403 aaKnown RBP3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 HILS1P60008 231 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ACSM2AQ08AH3 577 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SNTA1Q13424 505 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PKP1Q13835 747 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MYBPC2Q14324 1141 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TTC22Q5TAA0 569 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SCAIQ8N9R8 606 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SCAMP5Q8TAC9 235 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TBC1D22AQ8WUA7 517 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MTBPQ96DY7 904 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TRAPPC9Q96Q05 1148 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DDX23Q9BUQ8 820 aaKnown RBP3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ARNT2Q9HBZ2 717 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PRDM8Q9NQV8 689 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SLC22A11Q9NSA0 550 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 THAP1Q9NVV9 213 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MALT1Q9UDY8 824 aa3□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IGLV5-37A0A075B6J1 123 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 OR6C68A6NDL8 312 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CLGNO14967 610 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PRC1O43663 620 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IGLV2-11P01706 119 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TCEA1P23193 301 aaKnown RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DLX5P56178 289 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TNFAIP2Q03169 654 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GOLGA8FQ08AF8 430 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GRSF1Q12849 480 aaKnown RBP eCLIP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 DCTN1Q14203 1278 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ZRSR1Q15695 479 aaKnown RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PLEKHO1Q53GL0 409 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 XKR9Q5GH70 373 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 KLHL24Q6TFL4 600 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RRAGAQ7L523 313 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 BRSK2Q8IWQ3 736 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RFLNBQ8N5W9 214 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ATG16L2Q8NAA4 619 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 OR1N1Q8NGS0 311 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LILRB1Q8NHL6 650 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 OTUD7AQ8TE49 926 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NCSTNQ92542 709 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ATOH1Q92858 354 aaPredicted RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NPFFR1Q9GZQ6 430 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 IL25Q9H293 177 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PABPC3Q9H361 631 aaKnown RBP2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GRHL1Q9NZI5 618 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LRFN1Q9P244 771 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 UPB1Q9UBR1 384 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 FBXO40Q9UH90 709 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NFS1Q9Y697 457 aa2.99□□□□□ -1.93
RNU6-1088P-201ENST00000516850 A0A087WV62 115 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 A0A0U1RQJ8 604 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 TARSL2A2RTX5 802 aaKnown RBP2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 SYT5O00445 386 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CHL1O00533 1208 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PLIN1O60240 522 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LYL1P12980 280 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MXI1P50539 228 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 RBM5P52756 815 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ICA1Q05084 483 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ST3GAL1Q11201 340 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MYBPHQ13203 477 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PDCLQ13371 301 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 CTTNQ14247 550 aaKnown RBP2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 PUM3Q15397 648 aaKnown RBP2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LRRC24Q50LG9 513 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 FBXL22Q6P050 247 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MUC20Q8N307 709 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 ANKRD44Q8N8A2 993 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LMNTD1Q8N9Z9 388 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 POC1AQ8NBT0 407 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 GOLGA1Q92805 767 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 LTV1Q96GA3 475 aaPredicted RBP2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 OR1F2PQ96R84 312 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 NODALQ96S42 347 aa2.98□□□□□ -1.93
RNU6-1088P-201ENST00000516850 MMTAG2Q9BU76 263 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms