RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 CD160O95971 181 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CTSLP07711 333 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CSRP1P21291 193 aaKnown RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 GRIA4P48058 902 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CSNK1EP49674 416 aaKnown RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 RACK1P63244 317 aaKnown RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 SERINC3Q13530 473 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CA9Q16790 459 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ASTE1Q2TB18 679 aaPredicted RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 POM121L1PQ3SYA9 428 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 PPM1JQ5JR12 505 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CYP4V2Q6ZWL3 525 aaPredicted RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 H2AFVQ71UI9 128 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 PRPF39Q86UA1 669 aaKnown RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 MINDY1Q8N5J2 469 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 LZTR1Q8N653 840 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CHST14Q8NCH0 376 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 OR2AP1Q8NGE2 309 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CTNNBL1Q8WYA6 563 aaPredicted RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 HDAC8Q9BY41 377 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ZWILCHQ9H900 591 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 PREBQ9HCU5 417 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 TM9SF3Q9HD45 589 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 GPATCH2LQ9NWQ4 482 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 UVRAGQ9P2Y5 699 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 NENFQ9UMX5 172 aa11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 FCF1Q9Y324 198 aaKnown RBP11.41□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CHD5Q8TDI0 1954 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ARHGAP42A6NI28 874 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 AKR1B15C9JRZ8 316 aaPredicted RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 H3BRJ5 948 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 LATO43561 262 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 GSRP00390 522 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ERCC2P18074 760 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ARL4AP40617 200 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CCNHP51946 323 aaPredicted RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 METAP1P53582 386 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ADKP55263 362 aaKnown RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 RAD51Q06609 339 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 GRIK2Q13002 908 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 DPYSL2Q16555 572 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 MYLK3Q32MK0 819 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 AGBL4Q5VU57 503 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ERN2Q76MJ5 926 aaKnown RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 RYBPQ8N488 228 aaPredicted RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 GRIN3AQ8TCU5 1115 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 TEKT4Q8WW24 435 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ARHGEF26Q96DR7 871 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 HMCESQ96FZ2 354 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 KCTD15Q96SI1 283 aaPredicted RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 ORAI3Q9BRQ5 295 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 OSBPL1AQ9BXW6 950 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 SLC32A1Q9H598 525 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 LRRC19Q9H756 370 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 FSCN3Q9NQT6 498 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CWC15Q9P013 229 aaKnown RBP11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 DMTF1Q9Y222 760 aa11.4□□□□□ -0.58
SCARNA16.1-201ENST00000516133 A0A1B0GVT2 93 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 PLK4O00444 970 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 KRIT1O00522 736 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 VILLO15195 856 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 DFNA5O60443 496 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 KCNK5O95279 499 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 CER1O95813 267 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 ZNF883P0CG24 379 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 RARAP10276 462 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 CEACAM1P13688 526 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 ITGB7P26010 798 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 IL1R2P27930 398 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 SSR1P43307 286 aaKnown RBP11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 TBX2Q13207 712 aaPredicted RBP11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 KIF19Q2TAC6 998 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 HLA-BQ31612 363 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 SLC45A4Q5BKX6 768 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 KCNT1Q5JUK3 1230 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 PIP5KL1Q5T9C9 394 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 FBXL19Q6PCT2 694 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 LEKR1Q6ZMV7 388 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 TRIM69Q86WT6 500 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 ZNF564Q8TBZ8 553 aaPredicted RBP11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 RAB7BQ96AH8 199 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 SERAC1Q96JX3 654 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 GDAP1L1Q96MZ0 367 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 CHP1Q99653 195 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 TM6SF2Q9BZW4 377 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 ANKRD6Q9Y2G4 727 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 MFHAS1Q9Y4C4 1052 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 ACTL7AQ9Y615 435 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 CHD8Q9HCK8 2581 aa11.39□□□□□ -0.59
SCARNA16.1-201ENST00000516133 ACACBO00763 2458 aa11.38□□□□□ -0.59
SCARNA16.1-201ENST00000516133 PRAMEF11O60813 436 aa11.38□□□□□ -0.59
SCARNA16.1-201ENST00000516133 RNGTTO60942 597 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms