RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	NFATC4	Q14934	902 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	SLC35G1	Q2M3R5	365 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	SLC4A8	Q2Y0W8	1093 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	CTU1	Q7Z7A3	348 aa	Known RBP	4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	GPSM1	Q86YR5	675 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	COG3	Q96JB2	828 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	EPS8L2	Q9H6S3	715 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	SFXN1	Q9H9B4	322 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	HELLS	Q9NRZ9	838 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	KLHL42	Q9P2K6	505 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	TBC1D14	Q9P2M4	693 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	WNT16	Q9UBV4	365 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	DTNA	Q9Y4J8	743 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	IL16	Q14005	1332 aa		4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	AFDN	P55196	1824 aa	Known RBP	4.9	□□□□□ -1.63
RUFY3-215	ENST00000515479	TRIP12	Q14669	1992 aa	Predicted RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479		M0QYT0	321 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ACOT8	O14734	319 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	PMM2	O15305	246 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	NKX2-8	O15522	239 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	MSI1	O43347	362 aa	Known RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	NCK2	O43639	380 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	KLKB1	P03952	638 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ALDOC	P09972	364 aa	Known RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	CPA1	P15085	419 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	HOXC9	P31274	260 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ANP32A	P39687	249 aa	Known RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ROR2	Q01974	943 aa	Known RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	HYAL1	Q12794	435 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	DGKK	Q5KSL6	1271 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479		Q6ZTK2	550 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	KDELC2	Q7Z4H8	507 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ELP5	Q8TE02	316 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	PIGB	Q92521	554 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ZNF566	Q969W8	418 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	MCRS1	Q96EZ8	462 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	LMLN	Q96KR4	655 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	CAPNS2	Q96L46	248 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	ADAD1	Q96M93	576 aa	Known RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	TAOK3	Q9H2K8	898 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	NCKIPSD	Q9NZQ3	722 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	HACL1	Q9UJ83	578 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	TNFSF13B	Q9Y275	285 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	CACNA1S	Q13698	1873 aa		4.89	□□□□□ -1.63
RUFY3-215	ENST00000515479	GAGE12J	A6NER3	117 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	C3orf70	A6NLC5	250 aa	Predicted RBP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	PAPSS2	O95340	614 aa	Predicted RBP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	CER1	O95813	267 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	CYP1A2	P05177	515 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	PEPD	P12955	493 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	TNFSF4	P23510	183 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	EEF1G	P26641	437 aa	Known RBP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	CHRNA5	P30532	468 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	RARS	P54136	660 aa	Known RBP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	TAS2R50	P59544	299 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	KEAP1	Q14145	624 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	SAFB	Q15424	915 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	AAK1	Q2M2I8	961 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	INO80D	Q53TQ3	878 aa	Predicted RBP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	ALG10	Q5BKT4	473 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	ALG10B	Q5I7T1	473 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	FAM209B	Q5JX69	171 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479		Q5PR19	223 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	C10orf76	Q5T2E6	689 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	KRTAP5-11	Q6L8G4	156 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	SMIM5	Q71RC9	77 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	CNTROB	Q8N137	903 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	SARG	Q9BW04	601 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	DCLK3	Q9C098	648 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	CD93	Q9NPY3	652 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	CEP83	Q9Y592	693 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	KIF24	Q5T7B8	1368 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	ARFGEF2	Q9Y6D5	1785 aa		4.88	□□□□□ -1.63
RUFY3-215	ENST00000515479	MYH14	Q7Z406	1995 aa	Known RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	NRXN2	Q9P2S2	1712 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	IFITM10	A6NMD0	228 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	PCDH17	O14917	1159 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	NEURL1	O76050	574 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	DDN	O94850	711 aa	Predicted RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	HSP90AB1	P08238	724 aa	Known RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	MYL3	P08590	195 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	EPHX2	P34913	555 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	TMPO	P42166	694 aa	Known RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	TNNT2	P45379	298 aa	Predicted RBP	4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	TLE3	Q04726	772 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	GPR18	Q14330	331 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	GRM4	Q14833	912 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	ENTPD8	Q5MY95	495 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	NADSYN1	Q6IA69	706 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	TMEM88	Q6PEY1	159 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	SLC16A12	Q6ZSM3	486 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	C2CD5	Q86YS7	1000 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	PRR26	Q8N8Z3	221 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	EXD3	Q8N9H8	876 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	URB1-AS1	Q96HZ7	61 aa		4.87	□□□□□ -1.63
RUFY3-215	ENST00000515479	SEZ6L	Q9BYH1	1024 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms