RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 INO80CQ6PI98 192 aaPredicted RBP16.08■□□□□ 0.16
LMNA-223ENST00000515459 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 RBM44Q6ZP01 1051 aaKnown RBP16.08■□□□□ 0.16
LMNA-223ENST00000515459 DPY19L3Q6ZPD9 716 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 PASD1Q8IV76 773 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 FAM81BQ96LP2 452 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 IL12RB2Q99665 862 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.08■□□□□ 0.16
LMNA-223ENST00000515459 TKTL2Q9H0I9 626 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 CLMPQ9H6B4 373 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 ARHGEF38Q9NXL2 777 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 SALL4Q9UJQ4 1053 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 MAN1B1Q9UKM7 699 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 WASF2Q9Y6W5 498 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 MYO18BQ8IUG5 2567 aa16.08■□□□□ 0.16
LMNA-223ENST00000515459 A0A1W2PNU3 283 aaPredicted RBP16.07■□□□□ 0.16
LMNA-223ENST00000515459 EME2A4GXA9 379 aaPredicted RBP16.07■□□□□ 0.16
LMNA-223ENST00000515459 BECN2A8MW95 431 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 PPP1R3GB7ZBB8 358 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 FPGTO14772 594 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 TPP1O14773 563 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 TCEA3O75764 348 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 ADCY5O95622 1261 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 ITGB7P26010 798 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 SLC6A3Q01959 620 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 PDE1CQ14123 709 aaPredicted RBP16.07■□□□□ 0.16
LMNA-223ENST00000515459 DEFB133Q30KQ1 61 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 BRMS1LQ5PSV4 323 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 LRRC31Q6UY01 552 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 CCDC81Q6ZN84 652 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 SLC26A9Q7LBE3 791 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 ZSCAN30Q86W11 494 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 ZNF683Q8IZ20 524 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 ARL14Q8N4G2 192 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 PIGVQ9NUD9 493 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 RRN3Q9NYV6 651 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 KLF15Q9UIH9 416 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 PCDHGC3Q9UN70 934 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 FADS3Q9Y5Q0 445 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
LMNA-223ENST00000515459 DRGXA6NNA5 263 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 CDRT15L2A8MXV6 281 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 RAD51BO15315 384 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 AP1G1O43747 822 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 ZNF821O75541 412 aaPredicted RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 ENDOD1O94919 500 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 ERBB2P04626 1255 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 JUNDP17535 347 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 OR1E1P30953 314 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 L1CAMP32004 1257 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 CXCR3P49682 368 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 KCNC4Q03721 635 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 SGCGQ13326 291 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 NR0B2Q15466 257 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 OTUD1Q5VV17 481 aaPredicted RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 KIAA1614Q5VZ46 1190 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 RETSATQ6NUM9 610 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 GJB7Q6PEY0 223 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 FOXR1Q6PIV2 292 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 TRIM65Q6PJ69 517 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 TFAP2DQ7Z6R9 452 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 C1orf131Q8NDD1 294 aaKnown RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 LMX1AQ8TE12 382 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 BTN2A2Q8WVV5 523 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 PRR11Q96HE9 360 aaPredicted RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 NPY6RQ99463 290 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 KLF6Q99612 283 aaPredicted RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 HEPHQ9BQS7 1158 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
LMNA-223ENST00000515459 CEP44Q9C0F1 390 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 SYNCQ9H7C4 482 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 ANLNQ9NQW6 1124 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 STAP1Q9ULZ2 295 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 CTNND2Q9UQB3 1225 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 PAXBP1Q9Y5B6 917 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 KIF26BQ2KJY2 2108 aa16.06■□□□□ 0.16
LMNA-223ENST00000515459 RP1P56715 2156 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 I6L893 689 aaPredicted RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 MUSKO15146 869 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 SLC28A2O43868 658 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 MLLT3P42568 568 aaPredicted RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 RPIAP49247 311 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 SULT1E1P49888 294 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 SERPINH1P50454 418 aaKnown RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 SLC20A2Q08357 652 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 CARD16Q5EG05 197 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 PERM1Q5SV97 790 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 ACBD5Q5T8D3 534 aaPredicted RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 CRTC1Q6UUV9 634 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 ZDHHC17Q8IUH5 632 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 PCDH20Q8N6Y1 951 aaKnown RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 OR7D4Q8NG98 312 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 WDR36Q8NI36 951 aaKnown RBP16.05■□□□□ 0.16
LMNA-223ENST00000515459 WDR48Q8TAF3 677 aa16.05■□□□□ 0.16
LMNA-223ENST00000515459 GLMNQ92990 594 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms