RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 A0A0C4DFX4 3053 aa21.32■■□□□ 1
LSM6-207ENST00000515311 EDDM13A0A1B0GTR0 161 aa21.32■■□□□ 1
LSM6-207ENST00000515311 ANTXRLA6NF34 631 aa21.32■■□□□ 1
LSM6-207ENST00000515311 C5orf60A6NFR6 353 aa21.32■■□□□ 1
LSM6-207ENST00000515311 TTC34A8MYJ7 566 aa21.32■■□□□ 1
LSM6-207ENST00000515311 CHURC1-FNTBB4DL54 471 aa21.32■■□□□ 1
LSM6-207ENST00000515311 ZNF821O75541 412 aaPredicted RBP21.32■■□□□ 1
LSM6-207ENST00000515311 NEBLO76041 1014 aa21.32■■□□□ 1
LSM6-207ENST00000515311 GSRP00390 522 aa21.32■■□□□ 1
LSM6-207ENST00000515311 PRKCHP24723 683 aa21.32■■□□□ 1
LSM6-207ENST00000515311 RPS9P46781 194 aaKnown RBP21.32■■□□□ 1
LSM6-207ENST00000515311 NSUN2Q08J23 767 aaKnown RBP eCLIP21.32■■□□□ 1
LSM6-207ENST00000515311 ALG1LQ6GMV1 187 aa21.32■■□□□ 1
LSM6-207ENST00000515311 ALLCQ8N6M5 410 aa21.32■■□□□ 1
LSM6-207ENST00000515311 TSEN2Q8NCE0 465 aaKnown RBP21.32■■□□□ 1
LSM6-207ENST00000515311 GRK7Q8WTQ7 553 aa21.32■■□□□ 1
LSM6-207ENST00000515311 SLCO2A1Q92959 643 aa21.32■■□□□ 1
LSM6-207ENST00000515311 TEKT5Q96M29 485 aa21.32■■□□□ 1
LSM6-207ENST00000515311 MGME1Q9BQP7 344 aa21.32■■□□□ 1
LSM6-207ENST00000515311 DDX47Q9H0S4 455 aaKnown RBP21.32■■□□□ 1
LSM6-207ENST00000515311 L2HGDHQ9H9P8 463 aa21.32■■□□□ 1
LSM6-207ENST00000515311 SUN2Q9UH99 717 aa21.32■■□□□ 1
LSM6-207ENST00000515311 PCYOX1Q9UHG3 505 aa21.32■■□□□ 1
LSM6-207ENST00000515311 ATP8A1Q9Y2Q0 1164 aa21.32■■□□□ 1
LSM6-207ENST00000515311 SIT1Q9Y3P8 196 aa21.32■■□□□ 1
LSM6-207ENST00000515311 ATG2BQ96BY7 2078 aa21.32■■□□□ 1
LSM6-207ENST00000515311 TARSL2A2RTX5 802 aaKnown RBP21.31■■□□□ 1
LSM6-207ENST00000515311 SGK1O00141 431 aa21.31■■□□□ 1
LSM6-207ENST00000515311 STK25O00506 426 aa21.31■■□□□ 1
LSM6-207ENST00000515311 OPHN1O60890 802 aa21.31■■□□□ 1
LSM6-207ENST00000515311 GCATO75600 419 aa21.31■■□□□ 1
LSM6-207ENST00000515311 KLF8O95600 359 aaPredicted RBP21.31■■□□□ 1
LSM6-207ENST00000515311 KCNJ1P48048 391 aa21.31■■□□□ 1
LSM6-207ENST00000515311 PGBD5Q8N414 524 aa21.31■■□□□ 1
LSM6-207ENST00000515311 CNTD1Q8N815 330 aa21.31■■□□□ 1
LSM6-207ENST00000515311 OR2AP1Q8NGE2 309 aa21.31■■□□□ 1
LSM6-207ENST00000515311 RPLP0P6Q8NHW5 317 aa21.31■■□□□ 1
LSM6-207ENST00000515311 CCDC114Q96M63 670 aa21.31■■□□□ 1
LSM6-207ENST00000515311 GDAP1L1Q96MZ0 367 aa21.31■■□□□ 1
LSM6-207ENST00000515311 SPATA13Q96N96 652 aa21.31■■□□□ 1
LSM6-207ENST00000515311 POLR1EQ9GZS1 481 aaKnown RBP21.31■■□□□ 1
LSM6-207ENST00000515311 NT5MQ9NPB1 228 aa21.31■■□□□ 1
LSM6-207ENST00000515311 ZDHHC4Q9NPG8 344 aa21.31■■□□□ 1
LSM6-207ENST00000515311 TMEM221A6NGB7 291 aa21.3■■□□□ 1
LSM6-207ENST00000515311 M0R296 226 aa21.3■■□□□ 1
LSM6-207ENST00000515311 ADAM23O75077 832 aa21.3■■□□□ 1
LSM6-207ENST00000515311 ATG13O75143 517 aa21.3■■□□□ 1
LSM6-207ENST00000515311 IGSF6O95976 241 aa21.3■■□□□ 1
LSM6-207ENST00000515311 HLA-DQB2P05538 268 aa21.3■■□□□ 1
LSM6-207ENST00000515311 CSNK1DP48730 415 aa21.3■■□□□ 1
LSM6-207ENST00000515311 GDF10P55107 478 aa21.3■■□□□ 1
LSM6-207ENST00000515311 SNRPD1P62314 119 aaKnown RBP21.3■■□□□ 1
LSM6-207ENST00000515311 P3H1Q32P28 736 aa21.3■■□□□ 1
LSM6-207ENST00000515311 RALGPS1Q5JS13 557 aa21.3■■□□□ 1
LSM6-207ENST00000515311 EOGTQ5NDL2 527 aa21.3■■□□□ 1
LSM6-207ENST00000515311 Q6ZS52 159 aa21.3■■□□□ 1
LSM6-207ENST00000515311 Q6ZVU0 165 aa21.3■■□□□ 1
LSM6-207ENST00000515311 GSTA5Q7RTV2 222 aa21.3■■□□□ 1
LSM6-207ENST00000515311 ZNF567Q8N184 647 aa21.3■■□□□ 1
LSM6-207ENST00000515311 CEP112Q8N8E3 955 aa21.3■■□□□ 1
LSM6-207ENST00000515311 TXNDC5Q8NBS9 432 aaKnown RBP21.3■■□□□ 1
LSM6-207ENST00000515311 AGAP3Q96P47 875 aa21.3■■□□□ 1
LSM6-207ENST00000515311 IER2Q9BTL4 223 aa21.3■■□□□ 1
LSM6-207ENST00000515311 CEP41Q9BYV8 373 aa21.3■■□□□ 1
LSM6-207ENST00000515311 TNKS2Q9H2K2 1166 aa21.3■■□□□ 1
LSM6-207ENST00000515311 KLHL8Q9P2G9 620 aaPredicted RBP21.3■■□□□ 1
LSM6-207ENST00000515311 MMP17Q9ULZ9 603 aa21.3■■□□□ 1
LSM6-207ENST00000515311 WASH3PC4AMC7 463 aa21.29■■□□□ 1
LSM6-207ENST00000515311 MUSKO15146 869 aa21.29■■□□□ 1
LSM6-207ENST00000515311 GAS8O95995 478 aa21.29■■□□□ 1
LSM6-207ENST00000515311 EPHX1P07099 455 aa21.29■■□□□ 1
LSM6-207ENST00000515311 HLA-EP13747 358 aa21.29■■□□□ 1
LSM6-207ENST00000515311 CES1P23141 567 aa21.29■■□□□ 1
LSM6-207ENST00000515311 MAGEA9P43362 315 aa21.29■■□□□ 1
LSM6-207ENST00000515311 MAPK8P45983 427 aa21.29■■□□□ 1
LSM6-207ENST00000515311 RECQLP46063 649 aaPredicted RBP21.29■■□□□ 1
LSM6-207ENST00000515311 CAMK2GQ13555 558 aaPredicted RBP21.29■■□□□ 1
LSM6-207ENST00000515311 CARD16Q5EG05 197 aa21.29■■□□□ 1
LSM6-207ENST00000515311 ANKRD20A2Q5SQ80 823 aa21.29■■□□□ 1
LSM6-207ENST00000515311 C9orf64Q5T6V5 341 aa21.29■■□□□ 1
LSM6-207ENST00000515311 ANKRD20A1Q5TYW2 823 aa21.29■■□□□ 1
LSM6-207ENST00000515311 ANKRD20A3Q5VUR7 823 aa21.29■■□□□ 1
LSM6-207ENST00000515311 CWF19L1Q69YN2 538 aaKnown RBP21.29■■□□□ 1
LSM6-207ENST00000515311 ITPRIPL1Q6GPH6 555 aa21.29■■□□□ 1
LSM6-207ENST00000515311 KLHL7Q8IXQ5 586 aa21.29■■□□□ 1
LSM6-207ENST00000515311 CCDC89Q8N998 374 aa21.29■■□□□ 1
LSM6-207ENST00000515311 FLCNQ8NFG4 579 aa21.29■■□□□ 1
LSM6-207ENST00000515311 OR2A12Q8NGT7 310 aa21.29■■□□□ 1
LSM6-207ENST00000515311 PTPRN2Q92932 1015 aa21.29■■□□□ 1
LSM6-207ENST00000515311 TM6SF2Q9BZW4 377 aa21.29■■□□□ 1
LSM6-207ENST00000515311 CHRDQ9H2X0 955 aa21.29■■□□□ 1
LSM6-207ENST00000515311 MUC3AQ02505 3323 aa21.29■■□□□ 1
LSM6-207ENST00000515311 CTAGE15A4D2H0 777 aa21.28■■□□□ 1
LSM6-207ENST00000515311 ALOX15BO15296 676 aa21.28■■□□□ 1
LSM6-207ENST00000515311 ZBTB24O43167 697 aaPredicted RBP21.28■■□□□ 1
LSM6-207ENST00000515311 ECEL1O95672 775 aa21.28■■□□□ 1
LSM6-207ENST00000515311 CTAGE8P0CG41 777 aa21.28■■□□□ 1
LSM6-207ENST00000515311 HOXB2P14652 356 aa21.28■■□□□ 1
LSM6-207ENST00000515311 CR2P20023 1033 aa21.28■■□□□ 1
LSM6-207ENST00000515311 RGRP47804 291 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms