RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 MZF1P28698 734 aaPredicted RBP16.24■□□□□ 0.19
NUP54-214ENST00000514307 CSKP41240 450 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 SPARCL1Q14515 664 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 FAM78AQ5JUQ0 283 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 LGSNQ5TDP6 509 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 SYCE2Q6PIF2 218 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 POTEHQ6S545 545 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 RANBP10Q6VN20 620 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 NPAS3Q8IXF0 933 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 RIBC1Q8N443 379 aaPredicted RBP16.24■□□□□ 0.19
NUP54-214ENST00000514307 OR52K2Q8NGK3 314 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 OR52K1Q8NGK4 314 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 OR2W6PQ8NHA6 318 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 SPATA22Q8NHS9 363 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 OSCP1Q8WVF1 389 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 ALG14Q96F25 216 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 IFT43Q96FT9 208 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 OXNAD1Q96HP4 312 aaPredicted RBP16.24■□□□□ 0.19
NUP54-214ENST00000514307 ASB16Q96NS5 453 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
NUP54-214ENST00000514307 SEMA3CQ99985 751 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 ARNT2Q9HBZ2 717 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 ZFP14Q9HCL3 533 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 UBP1Q9NZI7 540 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 MARK1Q9P0L2 795 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 SLC24A2Q9UI40 661 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 CHMP2BQ9UQN3 213 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 IKBKGQ9Y6K9 419 aa16.24■□□□□ 0.19
NUP54-214ENST00000514307 EXOC1LA0A1B0GW35 172 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 PRAMEF12O95522 483 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 AGTP01019 485 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 SHBGP04278 402 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 PGAM1P18669 254 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 POU3F3P20264 500 aaPredicted RBP16.23■□□□□ 0.19
NUP54-214ENST00000514307 CA4P22748 312 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 CD86P42081 329 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 GRIA1P42261 906 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 WNT3AP56704 352 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 FASTKD3Q14CZ7 662 aaKnown RBP16.23■□□□□ 0.19
NUP54-214ENST00000514307 PDGFRLQ15198 375 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 RASA2Q15283 850 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 CYTH1Q15438 398 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 PCID2Q5JVF3 399 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 LEKR1Q6ZMV7 388 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 PRPF39Q86UA1 669 aaKnown RBP16.23■□□□□ 0.19
NUP54-214ENST00000514307 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.23■□□□□ 0.19
NUP54-214ENST00000514307 IPMKQ8NFU5 416 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 BHMTQ93088 406 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 CFAP36Q96G28 342 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 ATP6V1G3Q96LB4 118 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 SCUBE2Q9NQ36 999 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 ABCB8Q9NUT2 735 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 PLK2Q9NYY3 685 aa16.23■□□□□ 0.19
NUP54-214ENST00000514307 MTCL1Q9Y4B5 1905 aaKnown RBP16.22■□□□□ 0.19
NUP54-214ENST00000514307 NEDD8-MDP1E9PL57 170 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 INSIG1O15503 277 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 CDH16O75309 829 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 NFATC1O95644 943 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 MT-CYBP00156 380 aaPredicted RBP16.22■□□□□ 0.19
NUP54-214ENST00000514307 TYRP14679 529 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 MGAT1P26572 445 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 SSTR1P30872 391 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 ADRA1AP35348 466 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 MSH2P43246 934 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 MAPK8P45983 427 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 CSNK1DP48730 415 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 GPX6P59796 221 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 NIPAL4Q0D2K0 466 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 LMAN2Q12907 356 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 SPANXN3Q5MJ09 141 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 LY6G5CQ5SRR4 150 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 FAM182AQ5T1J6 154 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 ALG1LQ6GMV1 187 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 ZNF449Q6P9G9 518 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 KDELC1Q6UW63 502 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 ZNF534Q76KX8 674 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 TDRPQ86YL5 185 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 IGDCC3Q8IVU1 814 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 YAF2Q8IY57 180 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 GSDMBQ8TAX9 411 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 ARRDC2Q8TBH0 407 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 FBF1Q8TES7 1133 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 PTCD2Q8WV60 388 aaKnown RBP16.22■□□□□ 0.19
NUP54-214ENST00000514307 TADA1Q96BN2 335 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 LRCH3Q96II8 777 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 NUDCD1Q96RS6 583 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 MGME1Q9BQP7 344 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 GORASP1Q9BQQ3 440 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 FICDQ9BVA6 458 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 APOL5Q9BWW9 433 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 ACSS3Q9H6R3 686 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 VPS51Q9UID3 782 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 RABGEF1Q9UJ41 708 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 WNT6Q9Y6F9 365 aa16.22■□□□□ 0.19
NUP54-214ENST00000514307 FAM237BA0A1B0GVD1 139 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 LINC01565O15544 149 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 TIMM44O43615 452 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 RNF40O75150 1001 aa16.21■□□□□ 0.19
NUP54-214ENST00000514307 BANF1O75531 89 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms