RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CSE1LP55060 971 aaKnown RBP15.16■□□□□ 0.02
VCAN-211ENST00000513984 GNA12Q03113 381 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 LBRQ14739 615 aaKnown RBP15.16■□□□□ 0.02
VCAN-211ENST00000513984 HSP90AA5PQ58FG0 334 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 STXBP5Q5T5C0 1151 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 ADGRF1Q5T601 910 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 CCDC121Q6ZUS5 278 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 CHST9Q7L1S5 443 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 C16orf59Q7L2K0 433 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 PGBD5Q8N414 524 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 OTUD6BQ8N6M0 293 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 CCT6BQ92526 530 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 ZNF778Q96MU6 729 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 MANSC1Q9H8J5 431 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 ZNF334Q9HCZ1 680 aaPredicted RBP15.16■□□□□ 0.02
VCAN-211ENST00000513984 GKN1Q9NS71 199 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 C20orf96Q9NUD7 363 aaPredicted RBP15.16■□□□□ 0.02
VCAN-211ENST00000513984 NSMCE4AQ9NXX6 385 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 STOML2Q9UJZ1 356 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 ARL2BPQ9Y2Y0 163 aa15.16■□□□□ 0.02
VCAN-211ENST00000513984 CCT8L1PA6NM43 557 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 ANKRD65E5RJM6 399 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 LATS1O95835 1130 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 F11P03951 625 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 SPRP35270 261 aaPredicted RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 CD86P42081 329 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 MAGEA12P43365 314 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 MAXP61244 160 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 RPS24P62847 133 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 DSC2Q02487 901 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 POU6F1Q14863 301 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 STRA8Q7Z7C7 330 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 ARRDC2Q8TBH0 407 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 CLP1Q92989 425 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 ZFRQ96KR1 1074 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 AGAP2Q99490 1192 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 KDM4CQ9H3R0 1056 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 IL21Q9HBE4 155 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 PCDH10Q9P2E7 1040 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 AGO1Q9UL18 857 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 A0A1B0GVM2 712 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 WDR91A4D1P6 747 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 TCAF2A6NFQ2 919 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 KLF11O14901 512 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 OLFM2O95897 454 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 CHRNA4P43681 627 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 PDE1BQ01064 536 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 ITKQ08881 620 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 SF3A3Q12874 501 aaKnown RBP eCLIP15.15■□□□□ 0.02
VCAN-211ENST00000513984 IHHQ14623 411 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 SMAD1Q15797 465 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 PCSK7Q16549 785 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 ALG1LQ6GMV1 187 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 CNTN4Q8IWV2 1026 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 FIBCD1Q8N539 461 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 PTPRN2Q92932 1015 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 RANBP9Q96S59 729 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 DDX50Q9BQ39 737 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 TMEM106CQ9BVX2 250 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 PRKD2Q9BZL6 878 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 POLR1EQ9GZS1 481 aaKnown RBP15.15■□□□□ 0.02
VCAN-211ENST00000513984 TREX1Q9NSU2 369 aa15.15■□□□□ 0.02
VCAN-211ENST00000513984 A0A0D9SEW6 157 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 ILVBLA1L0T0 632 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 ZBBXA8MT70 800 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 MYO1CO00159 1063 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 GLRA3O75311 464 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 IL1BP01584 269 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 CNPP09543 421 aaKnown RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 IRF1P10914 325 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 MBL2P11226 248 aaPredicted RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 SGSHP51688 502 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 PPIGQ13427 754 aaKnown RBP eCLIP15.14■□□□□ 0.01
VCAN-211ENST00000513984 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 PABPC1LQ4VXU2 614 aaKnown RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 LACTB2Q53H82 288 aaPredicted RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 RNF43Q68DV7 783 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 KYAT3Q6YP21 454 aaKnown RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 OTOAQ7RTW8 1153 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 SETD3Q86TU7 594 aaPredicted RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 DNAJC5GQ8N7S2 189 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 CCDC63Q8NA47 563 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 OR52K2Q8NGK3 314 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 WBP2Q969T9 261 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 ATXN3LQ9H3M9 355 aa15.14■□□□□ 0.01
VCAN-211ENST00000513984 IARS2Q9NSE4 1012 aaKnown RBP15.14■□□□□ 0.01
VCAN-211ENST00000513984 TGM5O43548 720 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 TIMM44O43615 452 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 SIN3BO75182 1162 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ARNTP27540 789 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ETFBP38117 255 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 ARCN1P48444 511 aaKnown RBP15.13■□□□□ 0.01
VCAN-211ENST00000513984 SERPINB8P50452 374 aa15.13■□□□□ 0.01
VCAN-211ENST00000513984 MSLNQ13421 630 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms