RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	CEP350	Q5VT06	3117 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	ZSCAN5B	A6NJL1	495 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PHGDH	O43175	533 aa	Known RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	JUN	P05412	331 aa	Known RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	ALOX5	P09917	674 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	MMP8	P22894	467 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	MYF6	P23409	242 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	NOV	P48745	357 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	TRPC1	P48995	793 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	IST1	P53990	364 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PIGH	Q14442	188 aa	Predicted RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PPP4R4	Q6NUP7	873 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	ABRAXAS1	Q6UWZ7	409 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	BSND	Q8WZ55	320 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	CEP41	Q9BYV8	373 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	HOXD1	Q9GZZ0	328 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PCDHB12	Q9Y5F1	795 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PCDHGA11	Q9Y5H2	935 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	LRCH4	O75427	683 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	IL18RAP	O95256	599 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PRKCG	P05129	697 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	SERPINB9	P50453	376 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	CYP24A1	Q07973	514 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	STIL	Q15468	1287 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PAGE2B	Q5JRK9	111 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	UGT3A1	Q6NUS8	523 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	ENOSF1	Q7L5Y1	443 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	FAM160B2	Q86V87	743 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLC38A6	Q8IZM9	456 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PARP8	Q8N3A8	854 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	TMC2	Q8TDI7	906 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	ZNF516	Q92618	1163 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	TCF12	Q99081	682 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLC39A3	Q9BRY0	314 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	JPH1	Q9HDC5	661 aa	Predicted RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	TJP2	Q9UDY2	1190 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	IPO11	Q9UI26	975 aa	Known RBP	11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	FEM1B	Q9UK73	627 aa		11.28	□□□□□ -0.6
PDCD6-210	ENST00000513582	PRORSD1P	A6NEY8	169 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	FAM159B	A6NKW6	160 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	FAM155A	B1AL88	458 aa	Predicted RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	APOC4-APOC2	K7ER74	178 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	WNT10B	O00744	389 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	CHAD	O15335	359 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	TEX28	O15482	410 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	XYLB	O75191	536 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	APOC2	P02655	101 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	ARSA	P15289	507 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	TGM1	P22735	817 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	CXCR2	P25025	360 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	ELK4	P28324	431 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	CAP2	P40123	477 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	LSM3	P62310	102 aa	Known RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	CNTN2	Q02246	1040 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	SEL1L3	Q68CR1	1132 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	PLD6	Q8N2A8	252 aa	Known RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	CPSF7	Q8N684	471 aa	Known RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	JOSD2	Q8TAC2	188 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	ZNF606	Q8WXB4	792 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	PBXIP1	Q96AQ6	731 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	GMCL1	Q96IK5	515 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	LHPP	Q9H008	270 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	DHX35	Q9H5Z1	703 aa	Known RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	ATP13A3	Q9H7F0	1226 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	NEK6	Q9HC98	313 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	DCDC2	Q9UHG0	476 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	FBXO9	Q9UK97	447 aa	Predicted RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	TMX2	Q9Y320	296 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	TCAF1	Q9Y4C2	921 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	HES2	Q9Y543	173 aa		11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	DDX60L	Q5H9U9	1706 aa	Known RBP	11.27	□□□□□ -0.6
PDCD6-210	ENST00000513582	WDR27	A2RRH5	827 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	DLGAP1	O14490	977 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	ASNA1	O43681	348 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	SYNCRIP	O60506	623 aa	Known RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	FYN	P06241	537 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PSAP	P07602	524 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	GART	P22102	1010 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	RBL1	P28749	1068 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	ALDH4A1	P30038	563 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	SLC7A1	P30825	629 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	MYL6	P60660	151 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	ZNF699	Q32M78	642 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	CES3	Q6UWW8	571 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PLEKHG7	Q6ZR37	379 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PIGZ	Q86VD9	579 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	RALGPS2	Q86X27	583 aa	Predicted RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	MICALL2	Q8IY33	904 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	KIAA0319L	Q8IZA0	1049 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	ARFGAP1	Q8N6T3	406 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	CCNY	Q8ND76	341 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	OR5B17	Q8NGF7	314 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	SGCD	Q92629	289 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	MIR1-1HG	Q9H1L0	117 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	DEFB129	Q9H1M3	183 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	ADNP	Q9H2P0	1102 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	SCUBE2	Q9NQ36	999 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	FAM49B	Q9NUQ9	324 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms