RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 NAP1L3Q99457 506 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 GABRG3Q99928 467 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 CEP44Q9C0F1 390 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 TMEM245Q9H330 911 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 EPHX3Q9H6B9 360 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 HAUS2Q9NVX0 235 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 CACNA2D2Q9NY47 1150 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 UBA2Q9UBT2 640 aaPredicted RBP7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 HCN2Q9UL51 889 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 MMP17Q9ULZ9 603 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 SAR1BQ9Y6B6 198 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ABCA7Q8IZY2 2146 aa7.73□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF106Q9H2Y7 1883 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 EDDM13A0A1B0GTR0 161 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 TARSL2A2RTX5 802 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ANTXRLA6NF34 631 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 HACD1B0YJ81 288 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 J3KR12 359 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 PGRMC1O00264 195 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 FANCGO15287 622 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 MTSS1O43312 755 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CEP104O60308 925 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 TMCC1O94876 653 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 KLF8O95600 359 aaPredicted RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CD160O95971 181 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 FGGP02679 453 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 EPHX1P07099 455 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 DCNP07585 359 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 RBP3P10745 1247 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 HOXB2P14652 356 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CASQ1P31415 396 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 DEKP35659 375 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ZNF235Q14590 738 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 STARD3Q14849 445 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 HNRNPA1L2Q32P51 320 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 PKN3Q6P5Z2 889 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ARHGAP36Q6ZRI8 547 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 SYT13Q7L8C5 426 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ZC3H18Q86VM9 953 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CCDC13Q8IYE1 715 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 SPEM1Q8N4L4 309 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ALLCQ8N6M5 410 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 PCDH20Q8N6Y1 951 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 TXNDC5Q8NBS9 432 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CCNYQ8ND76 341 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ACTRT1Q8TDG2 376 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 TFB1MQ8WVM0 346 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ISG20Q96AZ6 181 aaKnown RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CCDC114Q96M63 670 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ACOX2Q99424 681 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 CINPQ9BW66 212 aaPredicted RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 FRMD8P1Q9BZ68 369 aaPredicted RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 FBRSQ9HAH7 460 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 ZDHHC4Q9NPG8 344 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 DLGAP2Q9P1A6 1054 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 SAE1Q9UBE0 346 aaPredicted RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 SUN2Q9UH99 717 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 SLCO3A1Q9UIG8 710 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 TTC7AQ9ULT0 858 aaPredicted RBP7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 STON1Q9Y6Q2 735 aa7.72□□□□□ -1.17
HMGXB3-204ENST00000513318 TCRBV7S2A1N4TA0A589 114 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CFAP69A5D8W1 941 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 TTC34A8MYJ7 566 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 PRR33A8MZF0 331 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 WASH3PC4AMC7 463 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 H7C0C1 242 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 SGK1O00141 431 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 MATN3O15232 486 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ALOX15BO15296 676 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 SYNCRIPO60506 623 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ADAM23O75077 832 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 NEBLO76041 1014 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 IGSF6O95976 241 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 PEX11BO96011 259 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 GSRP00390 522 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 MT-CO1P00395 513 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 HLA-EP13747 358 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CCNB1P14635 433 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 JUNDP17535 347 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 PRKCHP24723 683 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 HSPA9P38646 679 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 MMP13P45452 471 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 RECQLP46063 649 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ATP5OP48047 213 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 RENBPP51606 427 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CCR3P51677 355 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 DGKEP52429 567 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 EIF3EP60228 445 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 RHOAP61586 193 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC10A7Q0GE19 358 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 AP1B1Q10567 949 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CAMK2GQ13555 558 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 HNRNPDQ14103 355 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 GAS6Q14393 721 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 ELAVL3Q14576 367 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 LBRQ14739 615 aaKnown RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 PRKD1Q15139 912 aaPredicted RBP7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 DLG2Q15700 870 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 CRY1Q16526 586 aa7.71□□□□□ -1.18
HMGXB3-204ENST00000513318 LONRF2Q1L5Z9 754 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms