RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 RALGDSQ12967 914 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 PTK2BQ14289 1009 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 GPRIN1Q7Z2K8 1008 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 AMIGO2Q86SJ2 522 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 ERO1BQ86YB8 467 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 GPR22Q99680 433 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 C1QTNF1Q9BXJ1 281 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 IL22Q9GZX6 179 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 RHOJQ9H4E5 214 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 SLC2A6Q9UGQ3 507 aa9.39□□□□□ -0.91
LIMCH1-215ENST00000512632 CITO14578 2027 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 C9IYK1 514 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 AURKAO14965 403 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 TSPAN8P19075 237 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 NPY2RP49146 381 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 GJA9P57773 515 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 TAS2R39P59534 338 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 PPIDQ08752 370 aaKnown RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 KLHDC10Q6PID8 442 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 ARHGAP36Q6ZRI8 547 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 KDM1BQ8NB78 822 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 PPTC7Q8NI37 304 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 TMEM40Q8WWA1 233 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 NT5C3BQ969T7 300 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 HNRNPABQ99729 332 aaKnown RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 GBA3Q9H227 469 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 CCDC167Q9P0B6 97 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 OR12D3Q9UGF7 316 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 MID2Q9UJV3 735 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 DFFAO00273 331 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 CD4P01730 458 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 RPL34P49207 117 aaKnown RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 CCNA1P78396 465 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 CDH17Q12864 832 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 KIAA0319Q5VV43 1072 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 LRRC8EQ6NSJ5 796 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 STYXQ8WUJ0 223 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 CNDP1Q96KN2 507 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 TEKT5Q96M29 485 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 TKTL2Q9H0I9 626 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 MROH8Q9H579 483 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 ZBTB26Q9HCK0 441 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 TMEM30AQ9NV96 361 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 DERAQ9Y315 318 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 PPP2R3BQ9Y5P8 575 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 PMPCBO75439 489 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 LRIG2O94898 1065 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 PYGLP06737 847 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 PIM1P11309 404 aaPredicted RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 INHBCP55103 352 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 GRIN3AQ8TCU5 1115 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 DCPSQ96C86 337 aaKnown RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 ZNF560Q96MR9 790 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 ADAMTS10Q9H324 1103 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 WDCPQ9H6R7 721 aa9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.38□□□□□ -0.91
LIMCH1-215ENST00000512632 ATP6AP2A0A1C7CYW4 349 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 MYBPHLA2RUH7 354 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 E7ENX8 843 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 H3BSA7 217 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 ATP6AP2O75787 350 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 FAM58BPP0C7Q3 252 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 FAM200BP0CF97 657 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 RGS2P41220 211 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 SLC12A1Q13621 1099 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 SEPT6Q14141 434 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 OLFML2BQ68BL8 750 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 ITPRIPL1Q6GPH6 555 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 ZNF410Q86VK4 478 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 MFSD6LQ8IWD5 586 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 ARRDC4Q8NCT1 418 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 NDUFA13Q9P0J0 144 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 TLL2Q9Y6L7 1015 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 FAM95CA0A1B0GW59 222 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 MAGEB16A2A368 324 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 HNRNPRO43390 633 aaKnown RBP9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 CYP2C9P11712 490 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 PSME3P61289 254 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 USP46P62068 366 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 PDAP1Q13442 181 aaKnown RBP9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 CSHL1Q14406 222 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 AGKQ53H12 422 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 PITRM1Q5JRX3 1037 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 TSTD2Q5T7W7 516 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 ZFP1Q6P2D0 407 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 CNSTQ6PJW8 725 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 TXNDC5Q8NBS9 432 aaKnown RBP9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 ADCY4Q8NFM4 1077 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 SLC16A10Q8TF71 515 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 PHF21BQ96EK2 531 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 COLEC11Q9BWP8 271 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 RHOBTB2Q9BYZ6 727 aa9.37□□□□□ -0.91
LIMCH1-215ENST00000512632 TRPV6Q9H1D0 765 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms