RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 RASGRF2O14827 1237 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 NUDT21O43809 227 aaKnown RBP6.39□□□□□ -1.39
CHD1-208ENST00000512392 PPP1R11O60927 126 aaPredicted RBP6.39□□□□□ -1.39
CHD1-208ENST00000512392 CER1O95813 267 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 ITGB1P05556 798 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 S100A6P06703 90 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 TNFRSF1AP19438 455 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 DDCP20711 480 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 PTPN4P29074 926 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 SCNN1GP51170 649 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 HUNKP57058 714 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 PTH1RQ03431 593 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 MTX1Q13505 466 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 HNRNPDQ14103 355 aaKnown RBP6.39□□□□□ -1.39
CHD1-208ENST00000512392 SLC29A2Q14542 456 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 NPY5RQ15761 445 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 RIPPLY2Q5TAB7 128 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 SLFN12LQ6IEE8 588 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 SERPINA13PQ6UXR4 307 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 KCTD1Q719H9 257 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 CUZD1Q86UP6 607 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 TRIM74Q86UV6 250 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 TRIM73Q86UV7 250 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 AACSQ86V21 672 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 TTC5Q8N0Z6 440 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 FSTL5Q8N475 847 aaPredicted RBP6.39□□□□□ -1.39
CHD1-208ENST00000512392 ANKRD44Q8N8A2 993 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 EIF1ADQ8N9N8 165 aaKnown RBP6.39□□□□□ -1.39
CHD1-208ENST00000512392 LPCAT1Q8NF37 534 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 ROBO4Q8WZ75 1007 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 ARHGAP45Q92619 1136 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 NCLNQ969V3 563 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 PIWIL1Q96J94 861 aaKnown RBP6.39□□□□□ -1.39
CHD1-208ENST00000512392 CATSPER2Q96P56 530 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 FERMT1Q9BQL6 677 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 RAB33BQ9H082 229 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 KCNH6Q9H252 994 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 NRDE2Q9H7Z3 1164 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 DNAJC11Q9NVH1 559 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 GABRQQ9UN88 632 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 SSX2IPQ9Y2D8 614 aa6.39□□□□□ -1.39
CHD1-208ENST00000512392 PNMA6EA0A0J9YXQ4 647 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 SH2D7A6NKC9 451 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 A8MZ25 164 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 FAM86B1E9PN63 330 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 GCOM1H8Y6P7 765 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 SLC33A1O00400 549 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 WNT10BO00744 389 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 NME6O75414 186 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 SEC14L2O76054 403 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 MT-ATP6P00846 226 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 FTH1P19P0C7X4 201 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 ZNF3P17036 446 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 ACVR2AP27037 513 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 KIR3DL1P43629 444 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 CD97P48960 835 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 KHKP50053 298 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 VCPP55072 806 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 TBL3Q12788 808 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 MSMPQ1L6U9 139 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 LRIT3Q3SXY7 679 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 IGSF11Q5DX21 431 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 BTBD8Q5XKL5 378 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 ANKRD40Q6AI12 368 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 AFTPHQ6ULP2 937 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 DBX2Q6ZNG2 339 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 RHPN2Q8IUC4 686 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 KLHL7Q8IXQ5 586 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 OR13C2Q8NGS9 318 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 OR8K5Q8NH50 307 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 HUS1BQ8NHY5 278 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 RNASE8Q8TDE3 154 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 NETO1Q8TDF5 533 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 BCAS4Q8TDM0 211 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 FBXL20Q96IG2 436 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 PARK7Q99497 189 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 TLR10Q9BXR5 811 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 OSBPL8Q9BZF1 889 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 SLC6A20Q9NP91 592 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 KLHL14Q9P2G3 628 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 GULP1Q9UBP9 304 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 CAPN11Q9UMQ6 739 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 TDRKHQ9Y2W6 561 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 PCDHB6Q9Y5E3 794 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 DHX29Q7Z478 1369 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 A0A0A6YYC8 382 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 PRAMEF22A3QJZ6 481 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 FAM47DPA6NHR8 397 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 ACOD1A6NK06 481 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 SAC3D1A6NKF1 404 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 I3L1I5 382 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 IFNL4K9M1U5 179 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 SNAP23O00161 211 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 QSOX1O00391 747 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 DNALI1O14645 258 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 NVLO15381 856 aaKnown RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 OPHN1O60890 802 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 ZNF821O75541 412 aaPredicted RBP6.38□□□□□ -1.39
CHD1-208ENST00000512392 DNAJB5O75953 348 aa6.38□□□□□ -1.39
CHD1-208ENST00000512392 SIX3O95343 332 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms