RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 MASP2O00187 686 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 SCAMP1O15126 338 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 LIASO43766 372 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 BEST1O76090 585 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 RARGP13631 454 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 CD72P21854 359 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 PPARGP37231 505 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 GOLGA8DPQ0D2H9 430 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 RNPS1Q15287 305 aaKnown RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 TAF11Q15544 211 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 LSM12Q3MHD2 195 aaKnown RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 KIAA1755Q5JYT7 1200 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 JADE1Q6IE81 842 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM83HQ6ZRV2 1179 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 ADGRA1Q86SQ6 560 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 RASAL3Q86YV0 1011 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 TAGAPQ8N103 731 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 DNAAF1Q8NEP3 725 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 PSPC1Q8WXF1 523 aaKnown RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 CMTM3Q96MX0 182 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 FCRL5Q96RD9 977 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 HEMGNQ9BXL5 484 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 TOR3AQ9H497 397 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 PLEKHA4Q9H4M7 779 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 ARL8BQ9NVJ2 186 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 CFDP1Q9UEE9 299 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 ST3GAL5Q9UNP4 418 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 ADGRF5Q8IZF2 1346 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 LRRC53A6NM62 1247 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 LCKP06239 509 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 HNRNPCP07910 306 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 IRF1P10914 325 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 HOXA13P31271 388 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 CENPAP49450 140 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 ARSFP54793 590 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 OLIG2Q13516 323 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 SHBQ15464 509 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 SPATS1Q496A3 300 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 ARL13AQ5H913 290 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 SPECC1Q5M775 1068 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 TMEM268Q5VZI3 342 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 NAA16Q6N069 864 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 CHST9Q7L1S5 443 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 CCDC191Q8NCU4 936 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 BCAS4Q8TDM0 211 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAR1Q8WVX9 515 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 IP6K1Q92551 441 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 TTC14Q96N46 770 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 WDFY2Q96P53 400 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 SMARCAD1Q9H4L7 1026 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 POLR1BQ9H9Y6 1135 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 ASAH2Q9NR71 780 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 BABAM1Q9NWV8 329 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 CHORDC1Q9UHD1 332 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 HAO1Q9UJM8 370 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 ADAM21Q9UKJ8 722 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 PCDHGB5Q9Y5G0 923 aa5.75□□□□□ -1.49
HMGB1P47-201ENST00000511281 A0A1W2PQ09 198 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 TARM1B6A8C7 271 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 USP17L23D6RBM5 183 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 EBAG9O00559 213 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SH2B2O14492 632 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 USP12O75317 370 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SEC31AO94979 1220 aaKnown RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 PRR35P0CG20 571 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 PTPN2P17706 415 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 POU1F1P28069 291 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 TACR3P29371 465 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 CDAP32320 146 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 EIF2DP41214 584 aaKnown RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 CACNA2D1P54289 1103 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 CDH8P55286 799 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SNX16P57768 344 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 ROR1Q01973 937 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 HIST2H2ACQ16777 129 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 ME3Q16798 604 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 EDRF1Q3B7T1 1238 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 ALDH1L2Q3SY69 923 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SOWAHCQ53LP3 525 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SERPINA13PQ6UXR4 307 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MOB3CQ70IA8 216 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 TICAM1Q8IUC6 712 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 TMEM217Q8N7C4 229 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 OR4N2Q8NGD1 307 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 KAT2BQ92831 832 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MMABQ96EY8 250 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 RITA1Q96K30 269 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 UROC1Q96N76 676 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 YME1L1Q96TA2 773 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 IFT27Q9BW83 186 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 TM2D2Q9BX73 214 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 TEX12Q9BXU0 123 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MAK16Q9BXY0 300 aaKnown RBP5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 IKZF4Q9H2S9 585 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SH2D4AQ9H788 454 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MMRN2Q9H8L6 949 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 MLXIPLQ9NP71 852 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SH3GLB2Q9NR46 395 aa5.74□□□□□ -1.49
HMGB1P47-201ENST00000511281 SLC17A6Q9P2U8 582 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms