RNA–Protein interactions for RNA: ENST00000510871.5

RBM47-207, Transcript of RNA binding motif protein 47, humanhuman

TSL 1 (best)

Gene RBM47, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-207ENST00000510871 RAP1GDS1P52306 607 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 BRMS1LQ5PSV4 323 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 CERCAMQ5T4B2 595 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
RBM47-207ENST00000510871 TXNRD3NBQ6F5E7 133 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 CMC1Q7Z7K0 106 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 TDRPQ86YL5 185 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 PCDH19Q8TAB3 1148 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 KCTD4Q8WVF5 259 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 DDX1Q92499 740 aaKnown RBP13.72□□□□□ -0.21
RBM47-207ENST00000510871 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 VPS50Q96JG6 964 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 TWNKQ96RR1 684 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 C12orf65Q9H3J6 166 aaKnown RBP13.72□□□□□ -0.21
RBM47-207ENST00000510871 ARHGEF4Q9NR80 690 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 MPP6Q9NZW5 540 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 STYXL1Q9Y6J8 313 aa13.72□□□□□ -0.21
RBM47-207ENST00000510871 PAGE1O75459 146 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 LYPLA1O75608 230 aaPredicted RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 IL1R2P27930 398 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 FLT3LGP49771 235 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 CLCNKBP51801 687 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 TAS1R3Q7RTX0 852 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 RNF148Q8N7C7 305 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 APPL1Q9UKG1 709 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 PLLPQ9Y342 182 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 SF3B1O75533 1304 aaKnown RBP eCLIP13.71□□□□□ -0.21
RBM47-207ENST00000510871 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 KRT8P05787 483 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 LTA4HP09960 611 aaKnown RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 ITGB6P18564 788 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 POU5F1Q01860 360 aaKnown RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 USP4Q13107 963 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 C10orf107Q8IVU9 208 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 CEP19Q96LK0 163 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 CDRT15Q96T59 188 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 LPIN3Q9BQK8 851 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 ACE2Q9BYF1 805 aaPredicted RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 RBM47A0AV96 593 aaKnown RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 FKBP9O95302 570 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 ATG7O95352 703 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 BPGMP07738 259 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 CCDC166P0CW27 439 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 HOXB8P17481 243 aaPredicted RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 GRIA4P48058 902 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 MAXP61244 160 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 CTBP1Q13363 440 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 PLD1Q13393 1074 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 TEX44Q53QW1 395 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 ANKS6Q68DC2 871 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 FKBP9P1Q75LS8 142 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
RBM47-207ENST00000510871 RAB42Q8N4Z0 105 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 TNIP2Q8NFZ5 429 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 ALG9Q9H6U8 611 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 SLC12A4Q9UP95 1085 aa13.71□□□□□ -0.21
RBM47-207ENST00000510871 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 EVPLLA8MZ36 301 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 MYO1GB0I1T2 1018 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 GCATO75600 419 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 IMPDH2P12268 514 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 MYL4P12829 197 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 ETS2P15036 469 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.22
RBM47-207ENST00000510871 CA9Q16790 459 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 ARHGAP17Q68EM7 881 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 CROCCP3Q8IVE0 287 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 SLC35B2Q8TB61 432 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.71□□□□□ -0.22
RBM47-207ENST00000510871 PADI3Q9ULW8 664 aa13.71□□□□□ -0.22
RBM47-207ENST00000510871 MYH8P13535 1937 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 MSI1O43347 362 aaKnown RBP13.7□□□□□ -0.22
RBM47-207ENST00000510871 NDUFV1P49821 464 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 RAB10P61026 200 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 SLC25A3Q00325 362 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 WASHC5Q12768 1159 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 CYP4X1Q8N118 509 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 EMILIN2Q9BXX0 1053 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
RBM47-207ENST00000510871 PTPRJQ12913 1337 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 TMEM114B3SHH9 223 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 DDX39BQ13838 428 aaKnown RBP13.7□□□□□ -0.22
RBM47-207ENST00000510871 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
RBM47-207ENST00000510871 BTG3Q14201 252 aaPredicted RBP13.7□□□□□ -0.22
RBM47-207ENST00000510871 CHADLQ6NUI6 762 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 ECHDC2Q86YB7 292 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 GPR152Q8TDT2 470 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 CLEC4CQ8WTT0 213 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 SEMA3CQ99985 751 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 CAB39LQ9H9S4 337 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 CCDC167Q9P0B6 97 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 BTN3A1O00481 513 aa13.7□□□□□ -0.22
RBM47-207ENST00000510871 CLCN5P51795 746 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms