RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TMCC1O94876 653 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 MAP3K6O95382 1288 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 ENGP17813 658 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 ITIH2P19823 946 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 ID4P47928 161 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 ACAP1Q15027 740 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 TSR1Q2NL82 804 aaKnown RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 CARD16Q5EG05 197 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 LRRC73Q5JTD7 316 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 SPDYCQ5MJ68 293 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 STPG1Q5TH74 334 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 KIAA0895LQ68EN5 471 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 SLC23A3Q6PIS1 610 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 USP30Q70CQ3 517 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 TMEM139Q8IV31 216 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 C12orf50Q8NA57 414 aaPredicted RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 SPC24Q8NBT2 197 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 CADM4Q8NFZ8 388 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 KLK6Q92876 244 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 EDEM2Q9BV94 578 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 ZDHHC6Q9H6R6 413 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 HECAQ9UBI9 543 aaPredicted RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 EVLQ9UI08 416 aaPredicted RBP13.81□□□□□ -0.2
SNF8-206ENST00000509989 GGT7Q9UJ14 662 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 CA5BQ9Y2D0 317 aa13.81□□□□□ -0.2
SNF8-206ENST00000509989 DFFAO00273 331 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 KCNK3O14649 394 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 SPINT1O43278 529 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 DAPK3O43293 454 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 ADH1BP00325 375 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 WNT1P04628 370 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 FECHP22830 423 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 MAT2AP31153 395 aaKnown RBP13.8□□□□□ -0.2
SNF8-206ENST00000509989 ETFBP38117 255 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 MAPK8P45983 427 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 CLCN6P51797 869 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 CDH6P55285 790 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 YBEYP58557 167 aaPredicted RBP13.8□□□□□ -0.2
SNF8-206ENST00000509989 LMNB2Q03252 620 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 DPYSL3Q14195 570 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 BOLA3Q53S33 107 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 KDM7AQ6ZMT4 941 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 RYBPQ8N488 228 aaPredicted RBP13.8□□□□□ -0.2
SNF8-206ENST00000509989 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
SNF8-206ENST00000509989 PCDH20Q8N6Y1 951 aaKnown RBP13.8□□□□□ -0.2
SNF8-206ENST00000509989 FAM71BQ8TC56 605 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 TEKT4Q8WW24 435 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 RAPGEF5Q92565 580 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 IL21RQ9HBE5 538 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 SGK2Q9HBY8 427 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 UVRAGQ9P2Y5 699 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 IL36AQ9UHA7 158 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 NCKAP1Q9Y2A7 1128 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 CABIN1Q9Y6J0 2220 aa13.8□□□□□ -0.2
SNF8-206ENST00000509989 A0A1B0GVT2 93 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 H3BRJ5 948 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 TM4SF5O14894 197 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 ALOX15BO15296 676 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 PLRG1O43660 514 aaKnown RBP13.79□□□□□ -0.2
SNF8-206ENST00000509989 PRAMEF11O60813 436 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 MTA2O94776 668 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 LCA5LO95447 670 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 DESP17661 470 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 ABL2P42684 1182 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 MAGEA1P43355 309 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 HCAR3P49019 387 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 CSNK1EP49674 416 aaKnown RBP13.79□□□□□ -0.2
SNF8-206ENST00000509989 NDST2P52849 883 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 PARP15Q460N3 678 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 PARS2Q7L3T8 475 aaKnown RBP13.79□□□□□ -0.2
SNF8-206ENST00000509989 PSTKQ8IV42 348 aaKnown RBP13.79□□□□□ -0.2
SNF8-206ENST00000509989 PQLC3Q8N755 202 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 ACRBPQ8NEB7 543 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 TMIEQ8NEW7 156 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 PCDH19Q8TAB3 1148 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 FOXJ1Q92949 421 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 SLC6A18Q96N87 628 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 HEPHQ9BQS7 1158 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 GTPBP2Q9BX10 602 aaKnown RBP13.79□□□□□ -0.2
SNF8-206ENST00000509989 CEP44Q9C0F1 390 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 RETREG1Q9H6L5 497 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 TM9SF3Q9HD45 589 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 FZD4Q9ULV1 537 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 SCML1Q9UN30 329 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 ITM2BQ9Y287 266 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 PCDHA13Q9Y5I0 950 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 DUSP10Q9Y6W6 482 aa13.79□□□□□ -0.2
SNF8-206ENST00000509989 PCNX2A6NKB5 2137 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3DA0A087WVF3 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3IA0A087WXS9 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3EA0A087X179 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3KA0A087X1G2 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3FA6NER0 549 aaPredicted RBP13.78□□□□□ -0.2
SNF8-206ENST00000509989 TBC1D3LB9A6J9 549 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 KRIT1O00522 736 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 SLC30A4O14863 429 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 MFSD11O43934 449 aa13.78□□□□□ -0.2
SNF8-206ENST00000509989 BUB1BO60566 1050 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms