RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 PHF24Q9UPV7 400 aa3.62□□□□□ -1.83
USP53-205ENST00000509769 GDAQ9Y2T3 454 aa3.62□□□□□ -1.83
USP53-205ENST00000509769 A0A0G2JMP0 313 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SH3PXD2BA1X283 911 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 STX16O14662 325 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 RTN2O75298 545 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PIGNO95427 931 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 CNPP09543 421 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 CD6P30203 668 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 TCF7P36402 384 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 ETV3P41162 512 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 GCLMP48507 274 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 ALDH5A1P51649 535 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 CAPZA1P52907 286 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 ATP6V0D1P61421 351 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 CDKL1Q00532 357 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 NR1I3Q14994 352 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 ZNF174Q15697 407 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 C11orf91Q3C1V1 193 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 RESP18Q5W5W9 173 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 BEND4Q6ZU67 534 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 RAB11FIP2Q7L804 512 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 CATSPER4Q7RTX7 472 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 TMC4Q7Z404 712 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 IQCHQ86VS3 1027 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PHC2Q8IXK0 858 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 GUF1Q8N442 669 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 FAM47BQ8NA70 645 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 OR4M2Q8NGB6 313 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 OR8K3Q8NH51 312 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 ZNF507Q8TCN5 953 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 TRUB1Q8WWH5 349 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 OXNAD1Q96HP4 312 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 RDH12Q96NR8 316 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SLC38A2Q96QD8 506 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 KCTD14Q9BQ13 255 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 IFT27Q9BW83 186 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 FUNDC2Q9BWH2 189 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 KAT8Q9H7Z6 458 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 FOLH1BQ9HBA9 442 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SSU72Q9NP77 194 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 MYNNQ9NPC7 610 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SAMSN1Q9NSI8 373 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 ANKEF1Q9NU02 776 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PRMT7Q9NVM4 692 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 ZNF112Q9UJU3 913 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 NUDT5Q9UKK9 219 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 ITGA11Q9UKX5 1188 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 REXO2Q9Y3B8 237 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 PCDHGA6Q9Y5G7 932 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SLC30A1Q9Y6M5 507 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 MED23Q9ULK4 1368 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 LRRC37A3O60309 1634 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 A0A1B0GTH6 734 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SPDYE2BA6NHP3 402 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 AGAP5A6NIR3 686 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 M0R233 179 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 MAGEB2O15479 319 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 NMT2O60551 498 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 TULP3O75386 442 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PTTG1O95997 202 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 IFNA2P01563 188 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 LYNP07948 512 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 TMEM253P0C7T8 217 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SPDYE6P0CI01 402 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 IL7P13232 177 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 EIF4BP23588 611 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 RPA1P27694 616 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PDIA3P30101 505 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 HLA-FP30511 346 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 ZNF135P52742 658 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 RAB8AP61006 207 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PABPC4Q13310 644 aaKnown RBP eCLIP3.61□□□□□ -1.83
USP53-205ENST00000509769 NAA30Q147X3 362 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 STARD3Q14849 445 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 CHRNA2Q15822 529 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 HSDL1Q3SXM5 330 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 UGT3A2Q3SY77 523 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 RNF212Q495C1 297 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 XKR9Q5GH70 373 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 AADACL4Q5VUY2 407 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PPP1R18Q6NYC8 613 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 PKN3Q6P5Z2 889 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 FBXO46Q6PJ61 603 aaPredicted RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 LDHAL6AQ6ZMR3 332 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 IDO2Q6ZQW0 420 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 CREB3L2Q70SY1 520 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 FRMD5Q7Z6J6 570 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 HIPK1Q86Z02 1210 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 BLIDQ8IZY5 108 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 LRRC47Q8N1G4 583 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 LINC00301Q8NCQ3 95 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 OR7G1Q8NGA0 311 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 OR52K2Q8NGK3 314 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 AGAP11Q8TF27 550 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 BSNDQ8WZ55 320 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 SMG7Q92540 1137 aaKnown RBP3.61□□□□□ -1.83
USP53-205ENST00000509769 FRMD6Q96NE9 622 aa3.61□□□□□ -1.83
USP53-205ENST00000509769 TEFMQ96QE5 360 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms