RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TARDBPQ13148 414 aaKnown RBP eCLIP15.68■□□□□ 0.1
TPM3-219ENST00000509409 HES3Q5TGS1 186 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 SFMBT2Q5VUG0 894 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 CDKAL1Q5VV42 579 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 SASS6Q6UVJ0 657 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 KANSL1Q7Z3B3 1105 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 TMEM145Q8NBT3 493 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 OR13H1Q8NG92 308 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 FAM172AQ8WUF8 416 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 TSC1Q92574 1164 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 TBC1D31Q96DN5 1066 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 SLC17A9Q9BYT1 436 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 TM6SF2Q9BZW4 377 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 ZNF212Q9UDV6 495 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 DAAM1Q9Y4D1 1078 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 HS3ST3A1Q9Y663 406 aa15.68■□□□□ 0.1
TPM3-219ENST00000509409 C2CD4BA6NLJ0 364 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 NEMP1O14524 444 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 EPHB6O15197 1021 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 SIGLEC6O43699 453 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 PAK4O96013 591 aaPredicted RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 ADRB3P13945 408 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 DGKAP23743 735 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 ITGB7P26010 798 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 MAPKAPK2P49137 400 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 COPB1P53618 953 aaKnown RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 JAM2P57087 298 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 GEMIN4P57678 1058 aaKnown RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 SGCGQ13326 291 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 ZNF211Q13398 564 aaPredicted RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 ILKQ13418 452 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 POLD3Q15054 466 aaPredicted RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 ARTNQ5T4W7 220 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 SCYL2Q6P3W7 929 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 LEKR1Q6ZMV7 388 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 Q6ZSR6 202 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 STRADAQ7RTN6 431 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 PTAR1Q7Z6K3 402 aaPredicted RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 SLC25A45Q8N413 288 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 ARHGEF2Q92974 986 aaKnown RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 LRIG1Q96JA1 1093 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 PCDHB18PQ96TA0 734 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 MAGEB5Q9BZ81 275 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 RETREG1Q9H6L5 497 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 NDFIP2Q9NV92 336 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 IPO11Q9UI26 975 aaKnown RBP15.67■□□□□ 0.1
TPM3-219ENST00000509409 FADS3Q9Y5Q0 445 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 PKD1L2Q7Z442 2459 aa15.67■□□□□ 0.1
TPM3-219ENST00000509409 A6NNZ2 444 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 FAM72CH0Y354 149 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 TRIM38O00635 465 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 FFAR2O15552 330 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 RAMP2O60895 175 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 LRIG2O94898 1065 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 CALB1P05937 261 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 ALPPL2P10696 532 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 UNGP13051 313 aaPredicted RBP15.66■□□□□ 0.1
TPM3-219ENST00000509409 HOXB3P14651 431 aaPredicted RBP15.66■□□□□ 0.1
TPM3-219ENST00000509409 GPD1P21695 349 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 GKP32189 559 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 PTPN9P43378 593 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 NRG1Q02297 640 aaPredicted RBP15.66■□□□□ 0.1
TPM3-219ENST00000509409 UBXN1Q04323 297 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 CLEC16AQ2KHT3 1053 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 ZNF542PQ5EBM4 170 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 FAM72AQ5TYM5 149 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 FAM72DQ6L9T8 149 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 KIAA1161Q6NSJ0 714 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 TMC6Q7Z403 805 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 PDZD3Q86UT5 571 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 FAM72BQ86X60 149 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 DCP2Q8IU60 420 aaKnown RBP15.66■□□□□ 0.1
TPM3-219ENST00000509409 CCDC185Q8N715 623 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 OR6K2Q8NGY2 324 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 FAM174AQ8TBP5 190 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 ISG20Q96AZ6 181 aaKnown RBP15.66■□□□□ 0.1
TPM3-219ENST00000509409 NXPE2Q96DL1 559 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 DCBLD2Q96PD2 775 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 MAGEH1Q9H213 219 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 ANO10Q9NW15 660 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 TMEM248Q9NWD8 314 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 UCKL1Q9NWZ5 548 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 DNAJC28Q9NX36 388 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 SIK3Q9Y2K2 1263 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 CACNA1GO43497 2377 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 DSPP15924 2871 aaKnown RBP15.66■□□□□ 0.1
TPM3-219ENST00000509409 LAMA5O15230 3695 aa15.66■□□□□ 0.1
TPM3-219ENST00000509409 ANKRD62A6NC57 917 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 IGLON5A6NGN9 336 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 C16orf96A6NNT2 1141 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 KRIT1O00522 736 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 BUB1O43683 1085 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 CD160O95971 181 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 ACP1P24666 158 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 RFC1P35251 1148 aaPredicted RBP15.65■□□□□ 0.1
TPM3-219ENST00000509409 SNRPD1P62314 119 aaKnown RBP15.65■□□□□ 0.1
TPM3-219ENST00000509409 E2F1Q01094 437 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 SEMG2Q02383 582 aa15.65■□□□□ 0.1
TPM3-219ENST00000509409 PROX2Q3B8N5 592 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms