RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 CELF6Q96J87 481 aaKnown RBP11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 SEZ6LQ9BYH1 1024 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 ZDHHC7Q9NXF8 308 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 ARHGEF38Q9NXL2 777 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 IGSF9Q9P2J2 1179 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 MID2Q9UJV3 735 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 PCDHB5Q9Y5E4 795 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 CDY1Q9Y6F8 540 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 TANC1Q9C0D5 1861 aa11.2□□□□□ -0.62
SH3RF1-203ENST00000508685 A0A088AWK7 358 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 MAGEB16A2A368 324 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 AP3B1O00203 1094 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PAGE1O75459 146 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 VNN2O95498 520 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 GSRP00390 522 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 MPOP05164 745 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 GALTP07902 379 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ITGA2BP08514 1039 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 SPRP35270 261 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 CPOXP36551 454 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PRKAA2P54646 552 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 CRADDP78560 199 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 SATB1Q01826 763 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 TUBB3Q13509 450 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 OLIG2Q13516 323 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PDE1CQ14123 709 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 TRIM60Q495X7 471 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 RABGAP1LQ5R372 815 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 MFN1Q8IWA4 741 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ACTRT2Q8TDY3 377 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 STON2Q8WXE9 905 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ISL2Q96A47 359 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 C8orf48Q96LL4 319 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ECSITQ9BQ95 431 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 S100A14Q9HCY8 104 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 GMIPQ9P107 970 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 MARCOQ9UEW3 520 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ERI2A8K979 691 aaKnown RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 TPP1O14773 563 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PROCP04070 461 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ALDOAP04075 364 aaKnown RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 RALBP11234 206 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PTPN3P26045 913 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 TYK2P29597 1187 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 CCR1P32246 355 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 HADHAP40939 763 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PAPOLAP51003 745 aaKnown RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 TLE2Q04725 743 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 BTKQ06187 659 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PPIDQ08752 370 aaKnown RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 CES4AQ5XG92 561 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PGM2L1Q6PCE3 622 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 PRSS55Q6UWB4 352 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 SLC39A5Q6ZMH5 540 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 ANKRD33Q7Z3H0 272 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 DIS3LQ8TF46 1054 aaKnown RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 IFT43Q96FT9 208 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 GBP5Q96PP8 586 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 SEPT5Q99719 369 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 GORASP1Q9BQQ3 440 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 C20orf27Q9GZN8 174 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 COPG2Q9UBF2 871 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 EMCNQ9ULC0 261 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 SCML2Q9UQR0 700 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 NUP205Q92621 2012 aa11.19□□□□□ -0.62
SH3RF1-203ENST00000508685 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ARHGAP42A6NI28 874 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 NCAM2O15394 837 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 SIN3BO75182 1162 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 TBX18O95935 607 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 CXCL10P02778 98 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 APOA4P06727 396 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 CPA3P15088 417 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 DNAJB2P25686 324 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 MAGEA12P43365 314 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 IDH3AP50213 366 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 SERPINB8P50452 374 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 CLCN2P51788 898 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ROR2Q01974 943 aaKnown RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 GALNT2Q10471 571 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 PCLAFQ15004 111 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 MGAT5BQ3V5L5 792 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ARTNQ5T4W7 220 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 NAIF1Q69YI7 327 aaPredicted RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 PID1Q7Z2X4 250 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 TMCO2Q7Z6W1 182 aaPredicted RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 LCA5Q86VQ0 697 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 MON1AQ86VX9 555 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 GALNT15Q8N3T1 639 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 UCMAQ8WVF2 138 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms