RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 PTPN9P43378 593 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 CSNK1EP49674 416 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 RACK1P63244 317 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 KRT83P78385 493 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 SIM1P81133 766 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 SLC20A2Q08357 652 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 PTP4A2Q12974 167 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 SYCP1Q15431 976 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 DLG2Q15700 870 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 DBN1Q16643 649 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 KIF19Q2TAC6 998 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 HLA-BQ31612 363 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 ALFQ53S48 1182 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 C2CD6Q53TS8 623 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 EFHC2Q5JST6 749 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 FAM46CQ5VWP2 391 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 NCEH1Q6PIU2 408 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 LRSAM1Q6UWE0 723 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 GLRX5Q86SX6 157 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 PHF13Q86YI8 300 aaPredicted RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 SH2D3CQ8N5H7 860 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 AADATQ8N5Z0 425 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 GANCQ8TET4 914 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 OR8D1Q8WZ84 308 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 PSMB7Q99436 277 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 OMDQ99983 421 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 NAT10Q9H0A0 1025 aaKnown RBP8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 OSBPL2Q9H1P3 480 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 GAREM1Q9H706 876 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 TM9SF3Q9HD45 589 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 NLRC4Q9NPP4 1024 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 SLC25A13Q9UJS0 675 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 VPS28Q9UK41 221 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 ANKRD6Q9Y2G4 727 aa8.15□□□□□ -1.1
UBE2D3-222ENST00000508238 A0A0D9SEW6 157 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SPAARA0A1B0GVQ0 90 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 A0A1B0GVT2 93 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 E9PAM4 449 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 GOLGA8SH3BPF8 625 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SH3BP5O60239 455 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 PCDHGA12O60330 932 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 FSBPO95073 299 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 MT-CO1P00395 513 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 IL1BP01584 269 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 VAV1P15498 845 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 CDK11BP21127 795 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 MPSTP25325 297 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 OR1E1P30953 314 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 DRD3P35462 400 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 NUDT1P36639 197 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 CTSKP43235 329 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 PSMD8P48556 350 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 ADPRHP54922 357 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 FAM193AP78312 1265 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 UBXN1Q04323 297 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TYRO3Q06418 890 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SUZ12Q15022 739 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TRIP6Q15654 476 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 HIF1AQ16665 826 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 ARL13BQ3SXY8 428 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 CCDC14Q49A88 953 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 MANEALQ5VSG8 457 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 STRADAQ7RTN6 431 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 NAXDQ8IW45 347 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 DCAF4L2Q8NA75 395 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TMIEQ8NEW7 156 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 NEK11Q8NG66 645 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SLC30A5Q8TAD4 765 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 RXFP2Q8WXD0 754 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 CFAP57Q96MR6 1250 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 PCDHB18PQ96TA0 734 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 BPIFA3Q9BQP9 254 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 ZYG11BQ9C0D3 744 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 MUC3BQ9H195 1237 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 EBF2Q9HAK2 575 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 IL21RQ9HBE5 538 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TM7SF3Q9NS93 570 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 MPP6Q9NZW5 540 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 ADAM22Q9P0K1 906 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 OR12D3Q9UGF7 316 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 VPS51Q9UID3 782 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 PCOLCE2Q9UKZ9 415 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SARDHQ9UL12 918 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 MYO6Q9UM54 1294 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 FNDC3AQ9Y2H6 1198 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 NEUROG3Q9Y4Z2 214 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 FASNP49327 2511 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TMEM131Q92545 1883 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 NYNRINQ9P2P1 1898 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 ATRXP46100 2492 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 SPEGQ15772 3267 aa8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 TDRD6O60522 2096 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-222ENST00000508238 DMXL2Q8TDJ6 3036 aa8.13□□□□□ -1.11
UBE2D3-222ENST00000508238 A0A1W2PR77 199 aa8.13□□□□□ -1.11
UBE2D3-222ENST00000508238 TCRBV5S1A1TA0A578 114 aa8.13□□□□□ -1.11
UBE2D3-222ENST00000508238 SIGLEC16A6NMB1 481 aa8.13□□□□□ -1.11
UBE2D3-222ENST00000508238 FLRT2O43155 660 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms