RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FBXL12Q9NXK8 326 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 WSB2Q9NYS7 404 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 NCDNQ9UBB6 729 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 MBD1Q9UIS9 605 aaPredicted RBP15.26■□□□□ 0.03
RNF4-210ENST00000508235 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 ACTL7AQ9Y615 435 aa15.26■□□□□ 0.03
RNF4-210ENST00000508235 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 GRID2IPA4D2P6 1211 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 MIF4GDA9UHW6 222 aaKnown RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 MID1O15344 667 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 SLC7A4O43246 635 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 ZNF821O75541 412 aaPredicted RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 POP4O95707 220 aaKnown RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 RETP07949 1114 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 CETN2P41208 172 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 RENBPP51606 427 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 CCNHP51946 323 aaPredicted RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 COPS2P61201 443 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 GALNT2Q10471 571 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 TFDP2Q14188 446 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 GRM3Q14832 879 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 LPAL2Q16609 132 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 TFDP3Q5H9I0 405 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 LEKR1Q6ZMV7 388 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 BZW1Q7L1Q6 419 aaKnown RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 PEX26Q7Z412 305 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 RFX6Q8HWS3 928 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 RYBPQ8N488 228 aaPredicted RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 PQLC3Q8N755 202 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 FRMD1Q8N878 549 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 LRRC57Q8N9N7 239 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 CADM4Q8NFZ8 388 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 EXD1Q8NHP7 514 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 RUBCNQ92622 972 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 TOE1Q96GM8 510 aaKnown RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 CINPQ9BW66 212 aaPredicted RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 OSBPL1AQ9BXW6 950 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 HECAQ9UBI9 543 aaPredicted RBP15.25■□□□□ 0.03
RNF4-210ENST00000508235 TRIM10Q9UDY6 481 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 GUCA1BQ9UMX6 200 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 PCDHGA5Q9Y5G8 931 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 PCDHA3Q9Y5H8 950 aa15.25■□□□□ 0.03
RNF4-210ENST00000508235 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 A0A1W2PP55 124 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 MFSD11O43934 449 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 GFRA3O60609 400 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 RNASEH2AO75792 299 aaKnown RBP15.24■□□□□ 0.03
RNF4-210ENST00000508235 CTNNA2P26232 953 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 HSPA9P38646 679 aaKnown RBP15.24■□□□□ 0.03
RNF4-210ENST00000508235 GARSP41250 739 aaKnown RBP15.24■□□□□ 0.03
RNF4-210ENST00000508235 CDKN2BP42772 138 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 DHPSP49366 369 aaPredicted RBP15.24■□□□□ 0.03
RNF4-210ENST00000508235 LBRQ14739 615 aaKnown RBP15.24■□□□□ 0.03
RNF4-210ENST00000508235 SYCP2LQ5T4T6 812 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 SLC9A4Q6AI14 798 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 NT5DC3Q86UY8 548 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 FAM124AQ86V42 546 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 CCDC50Q8IVM0 306 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 TMEFF1Q8IYR6 380 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 UBL4BQ8N7F7 174 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 HINFPQ9BQA5 517 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 KDM4CQ9H3R0 1056 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 ZDHHC6Q9H6R6 413 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 SEPT3Q9UH03 358 aa15.24■□□□□ 0.03
RNF4-210ENST00000508235 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
RNF4-210ENST00000508235 ABCA7Q8IZY2 2146 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 RALGAPA1Q6GYQ0 2036 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 LRRC72A6NJI9 287 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 KPNA3O00505 521 aaPredicted RBP15.23■□□□□ 0.03
RNF4-210ENST00000508235 KRIT1O00522 736 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 MAFKO60675 156 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 LRP3O75074 770 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 LEFTY1O75610 366 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 EPN2O95208 641 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 CTSLP07711 333 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 CCNCP24863 283 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 CSNK1DP48730 415 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 RWDD2BP57060 319 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 ZNF33AQ06730 810 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 NSUN2Q08J23 767 aaKnown RBP eCLIP15.23■□□□□ 0.03
RNF4-210ENST00000508235 ZNF235Q14590 738 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 CYTH1Q15438 398 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 PPP2R5EQ16537 467 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 TAZQ16635 292 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 MYLK3Q32MK0 819 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 ARSIQ5FYB1 569 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 LYSMD4Q5XG99 296 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 MFSD7Q6UXD7 560 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 SPOCD1Q6ZMY3 1216 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 ARHGAP36Q6ZRI8 547 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 ASCL5Q7RTU5 278 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 AADATQ8N5Z0 425 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 GPR161Q8N6U8 529 aaKnown RBP15.23■□□□□ 0.03
RNF4-210ENST00000508235 NETO2Q8NC67 525 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 CHST14Q8NCH0 376 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 GRIN3AQ8TCU5 1115 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 KRT35Q92764 455 aa15.23■□□□□ 0.03
RNF4-210ENST00000508235 FATE1Q969F0 183 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms