RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SLITRK4Q8IW52 837 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 FBXO18Q8NFZ0 1043 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 FRS2Q8WU20 508 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 STARD8Q92502 1023 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 LARP4BQ92615 738 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 RNF34Q969K3 372 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 LURAP1Q96LR2 239 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 SRRTQ9BXP5 876 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 DUSP16Q9BY84 665 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 FGFBP2Q9BYJ0 223 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 RDH14Q9HBH5 336 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 CYP4F12Q9HCS2 524 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 OLA1Q9NTK5 396 aaKnown RBP7.39□□□□□ -1.23
VCAN-207ENST00000507162 PCDHB3Q9Y5E6 796 aa7.39□□□□□ -1.23
VCAN-207ENST00000507162 PRSS44E7EML9 344 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 SPTLC2O15270 562 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 RFPL1O75677 317 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 LUC7L3O95232 432 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 ZBED1O96006 694 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 P4HA1P13674 534 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 PDGFRAP16234 1089 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 GAP43P17677 238 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 TKTL1P51854 596 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 RPS21P63220 83 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 NUCB2P80303 420 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 CYP24A1Q07973 514 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 NCOA4Q13772 614 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 ERV3-1Q14264 604 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 PSMD6Q15008 389 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 ELOCQ15369 112 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 SNRNP35Q16560 246 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 FAM133BQ5BKY9 247 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 NADSYN1Q6IA69 706 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 ERN2Q76MJ5 926 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 UNC93AQ86WB7 457 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 HID1Q8IV36 788 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 UNC45BQ8IWX7 931 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 NLGN4XQ8N0W4 816 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 CCDC112Q8NEF3 446 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 NLGN4YQ8NFZ3 816 aaPredicted RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 OR6C4Q8NGE1 309 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 TWNKQ96RR1 684 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 DDX50Q9BQ39 737 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 REPIN1Q9BWE0 567 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 KIAA1586Q9HCI6 787 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 SLAMF7Q9NQ25 335 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 GPR27Q9NS67 375 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 LRIT1Q9P2V4 623 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 PNMA8BQ9ULN7 279 aaPredicted RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 NAALADL1Q9UQQ1 740 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 BOLA1Q9Y3E2 137 aa7.38□□□□□ -1.23
VCAN-207ENST00000507162 MRPS18BQ9Y676 258 aaKnown RBP7.38□□□□□ -1.23
VCAN-207ENST00000507162 IGLON5A6NGN9 336 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 CLIC2O15247 247 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 KATNA1O75449 491 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 CTSLP07711 333 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 SNRPB2P08579 225 aaKnown RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 ALPIP09923 528 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 ALDH4A1P30038 563 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 CHRNA3P32297 505 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 CSTF2P33240 577 aaKnown RBP eCLIP7.37□□□□□ -1.23
VCAN-207ENST00000507162 CASP4P49662 377 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 CYP2J2P51589 502 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 SULT2A1Q06520 285 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 ELOAQ14241 798 aaKnown RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 TMEM259Q4ZIN3 620 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 ZRANB3Q5FWF4 1079 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 DCAF12Q5T6F0 453 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 BSPRYQ5W0U4 402 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 LVRNQ6Q4G3 990 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 SPRED1Q7Z699 444 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 GKN2Q86XP6 184 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 FAM129CQ86XR2 697 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 XYLT1Q86Y38 959 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 LGI2Q8N0V4 545 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 FSTL5Q8N475 847 aaPredicted RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 FAM184AQ8NB25 1140 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 TSACCQ96A04 125 aaPredicted RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 C19orf60Q96EN9 201 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 PRICKLE1Q96MT3 831 aaPredicted RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 NT5C1AQ9BXI3 368 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 ASPSCR1Q9BZE9 553 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 ULBP1Q9BZM6 244 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 NUCKS1Q9H1E3 243 aaKnown RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 SLC25A13Q9UJS0 675 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 PILRAQ9UKJ1 303 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 PCDHGA3Q9Y5H0 932 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 OAS3Q9Y6K5 1087 aaKnown RBP7.37□□□□□ -1.23
VCAN-207ENST00000507162 POLEQ07864 2286 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 JMJD1CQ15652 2540 aa7.37□□□□□ -1.23
VCAN-207ENST00000507162 CDC14CA4D256 554 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 RNF103O00237 685 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ALOX15BO15296 676 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 SLC26A4O43511 780 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 KRT86O43790 486 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 ATP9BO43861 1147 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 DNAJB5O75953 348 aa7.36□□□□□ -1.23
VCAN-207ENST00000507162 MOCS2O96007 188 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms