RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ARF5P84085 180 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 IL9RQ01113 521 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 PTP4A2Q12974 167 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 SHBQ15464 509 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 DNAJC24Q6P3W2 148 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 LINGO4Q6UY18 593 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 SLFN11Q7Z7L1 901 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 NLRP14Q86W24 1093 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 GATAD2AQ86YP4 633 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 SLC30A5Q8TAD4 765 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 FAM172AQ8WUF8 416 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 ASB12Q8WXK4 309 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 ARRDC3Q96B67 414 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 EIF3CQ99613 913 aaKnown RBP14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 EPAS1Q99814 870 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 AGPAT1Q99943 283 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 CATSPERBQ9H7T0 1116 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 SEPT11Q9NVA2 429 aaKnown RBP14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 WASF2Q9Y6W5 498 aa14.7□□□□□ -0.06
HMGCS1-203ENST00000507004 GOLGA4Q13439 2230 aaKnown RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 NEMP2A6NFY4 417 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 GOLGA8CPA6NN73 597 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 A6NNZ2 444 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 PLK4O00444 970 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 WNT9AO14904 365 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 EPHB6O15197 1021 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 SLC31A1O15431 190 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 POP4O95707 220 aaKnown RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 CAPNS1P04632 268 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 THEGLP0DJG4 465 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 ALPPL2P10696 532 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 ADRB3P13945 408 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 CKMT2P17540 419 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 RFC1P35251 1148 aaPredicted RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 DNA2P51530 1060 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 SUOXP51687 545 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 HDAC4P56524 1084 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 E2F1Q01094 437 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF284Q2VY69 593 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 POM121L1PQ3SYA9 428 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 FILIP1LQ4L180 1135 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 INO80DQ53TQ3 878 aaPredicted RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 DCUN1D2Q6PH85 259 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 WDR59Q6PJI9 974 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 EID2Q8N6I1 236 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 CHST14Q8NCH0 376 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 DENND6BQ8NEG7 585 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 OR2AP1Q8NGE2 309 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 JOSD2Q8TAC2 188 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 GRIN3AQ8TCU5 1115 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 ARHGEF2Q92974 986 aaKnown RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 NCAPGQ9BPX3 1015 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 TNKS2Q9H2K2 1166 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 TMPRSS4Q9NRS4 437 aa14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 HECAQ9UBI9 543 aaPredicted RBP14.69□□□□□ -0.06
HMGCS1-203ENST00000507004 ACACAQ13085 2346 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 TP53BP1Q12888 1972 aaPredicted RBP14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 TOR1BO14657 336 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 FGF10O15520 208 aaPredicted RBP14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 KDELR3O43731 214 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF821O75541 412 aaPredicted RBP14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 GLDCP23378 1020 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF211Q13398 564 aaPredicted RBP14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 GRM3Q14832 879 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 PARP15Q460N3 678 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 TMEM259Q4ZIN3 620 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF805Q5CZA5 627 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 PRAMEF14Q5SWL7 426 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 ARTNQ5T4W7 220 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 ACAD10Q6JQN1 1059 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 KYAT3Q6YP21 454 aaKnown RBP14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 MON1BQ7L1V2 547 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 ABI3BPQ7Z7G0 1075 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 RTL3Q8N8U3 475 aaKnown RBP14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 TSC1Q92574 1164 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 PCDHB18PQ96TA0 734 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 BPIFA3Q9BQP9 254 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 DUSP23Q9BVJ7 150 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 C1QTNF7Q9BXJ2 289 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 SLC17A9Q9BYT1 436 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 USP29Q9HBJ7 922 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 DNAI1Q9UI46 699 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 FADS3Q9Y5Q0 445 aa14.68□□□□□ -0.06
HMGCS1-203ENST00000507004 PTPRBP23467 1997 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 WASH4PA8MWX3 477 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 H3BM21 787 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 JUPP14923 745 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 TNFAIP3P21580 790 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 EPHB2P29323 1055 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 RABIFP47224 123 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 ACADVLP49748 655 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF135P52742 658 aaPredicted RBP14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 HNRNPKP61978 463 aaKnown RBP eCLIP14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 SGCGQ13326 291 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 NCAPHQ15003 741 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 DHRS13Q6UX07 377 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 KANSL1Q7Z3B3 1105 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms