RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SNRPD1P62314 119 aaKnown RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 ELAVL3Q14576 367 aaKnown RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 CCDC181Q5TID7 509 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 MARC1Q5VT66 337 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 DPY19L3Q6ZPD9 716 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 ZC3H18Q86VM9 953 aaKnown RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 STK40Q8N2I9 435 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 PGBD5Q8N414 524 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 TSEN2Q8NCE0 465 aaKnown RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 TSTD1Q8NFU3 115 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 OR2AP1Q8NGE2 309 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 COG1Q8WTW3 980 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 NSMCE1Q8WV22 266 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 TFB1MQ8WVM0 346 aaKnown RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 NELL1Q92832 810 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 MRGPRX1Q96LB2 322 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 QKIQ96PU8 341 aaKnown RBP eCLIP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 HHIPQ96QV1 700 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 IL12RB2Q99665 862 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 NAPGQ99747 312 aaPredicted RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 SEPT3Q9UH03 358 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 AMACRQ9UHK6 382 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 PPM1HQ9ULR3 514 aa13.05□□□□□ -0.32
TCOF1-210ENST00000506767 R3HDM2Q9Y2K5 976 aaKnown RBP13.05□□□□□ -0.32
TCOF1-210ENST00000506767 CCDC163A0A0D9SF12 145 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CTAGE9A4FU28 777 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 ALDH1A2O94788 518 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 FGGP02679 453 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CTSLP07711 333 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 RBP3P10745 1247 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 TCP1P17987 556 aaKnown RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 NDUFV2P19404 249 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CR2P20023 1033 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 MMP13P45452 471 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 RGRP47804 291 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CCNHP51946 323 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 EIF3EP60228 445 aaKnown RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 RHOAP61586 193 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 RPS14P62263 151 aaKnown RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 NHLH1Q02575 133 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 AP1B1Q10567 949 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 MYLK3Q32MK0 819 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 ZNF528Q3MIS6 628 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 SLC45A4Q5BKX6 768 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 ALG1LQ6GMV1 187 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 TSSK4Q6SA08 328 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 B4GALNT4Q76KP1 1039 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 TMPRSS6Q8IU80 811 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CHST14Q8NCH0 376 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 TMIEQ8NEW7 156 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 SLC35B2Q8TB61 432 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 ACTRT1Q8TDG2 376 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 MAIP1Q8WWC4 291 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 OR8D1Q8WZ84 308 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 ERLEC1Q96DZ1 483 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CCDC114Q96M63 670 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 MGME1Q9BQP7 344 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 FRMD8P1Q9BZ68 369 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 TM6SF2Q9BZW4 377 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 HECAQ9UBI9 543 aaPredicted RBP13.04□□□□□ -0.32
TCOF1-210ENST00000506767 ATP8A1Q9Y2Q0 1164 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
TCOF1-210ENST00000506767 CACNA1IQ9P0X4 2223 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 BCLAF3A2AJT9 711 aaKnown RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 KCNK1O00180 336 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 MTSS1O43312 755 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 BNIP3LO60238 219 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 POP4O95707 220 aaKnown RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 IGSF6O95976 241 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 JCHAINP01591 159 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 RBL1P28749 1068 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 CHRNA3P32297 505 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 RECQLP46063 649 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 CSTF1Q05048 431 aaKnown RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ZBTB16Q05516 673 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 DMWDQ09019 674 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 WASHC5Q12768 1159 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ZBTB17Q13105 803 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ZNF235Q14590 738 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ANGPT1Q15389 498 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 TEX44Q53QW1 395 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ATXN7L2Q5T6C5 722 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ZNF776Q68DI1 518 aaPredicted RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ANO7Q6IWH7 933 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 ADAT2Q7Z6V5 191 aaKnown RBP13.03□□□□□ -0.32
TCOF1-210ENST00000506767 SRLQ86TD4 932 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 BBS5Q8N3I7 341 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 CNTD1Q8N815 330 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 HMGB4Q8WW32 186 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 HTR3CQ8WXA8 447 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 LRIG1Q96JA1 1093 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 MS4A14Q96JA4 679 aa13.03□□□□□ -0.32
TCOF1-210ENST00000506767 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms