RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SUPT6HQ7KZ85 1726 aaKnown RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 KIF14Q15058 1648 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 MED1Q15648 1581 aaPredicted RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 KIAA1107Q9UPP5 1409 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 SMIM35A0A1B0GVV1 85 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 A0A1W2PPH5 198 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 WIPF3A6NGB9 483 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 RHODO00212 210 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 CERS1P27544 350 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 MAN1A1P33908 653 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 CCR9P51686 369 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 CFHR1Q03591 330 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 PMPCAQ10713 525 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 VWA5B1Q5TIE3 1220 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 CCDC30Q5VVM6 783 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 TMEM268Q5VZI3 342 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 TTLL5Q6EMB2 1281 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 PLD5Q8N7P1 536 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 TDRD7Q8NHU6 1098 aaKnown RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 KCNG4Q8TDN1 519 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 ZNF419Q96HQ0 510 aaPredicted RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 LBHD1Q9BQE6 289 aaPredicted RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 USP44Q9H0E7 712 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 HIPK3Q9H422 1215 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 CXorf56Q9H5V9 222 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 AAMDCQ9H7C9 122 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 PPP1R14DQ9NXH3 145 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 IL1RAPL1Q9NZN1 696 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 HCN3Q9P1Z3 774 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 ORC3Q9UBD5 711 aaPredicted RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 PEMTQ9UBM1 199 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 CFDP1Q9UEE9 299 aaPredicted RBP6.36□□□□□ -1.39
HERC4-213ENST00000506515 LAMP3Q9UQV4 416 aa6.36□□□□□ -1.39
HERC4-213ENST00000506515 A2ML1A8K2U0 1454 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 A0A0A0MQY5 61 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 TP73O15350 636 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 NEURL1O76050 574 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 DDAH2O95865 285 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ADAP00813 363 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 IL1AP01583 271 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 WNT1P04628 370 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 CAPN3P20807 821 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ATP5F1P24539 256 aaPredicted RBP6.35□□□□□ -1.39
HERC4-213ENST00000506515 EPHB2P29323 1055 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 RXRGP48443 463 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 HARS2P49590 506 aaKnown RBP6.35□□□□□ -1.39
HERC4-213ENST00000506515 UFM1P61960 85 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 EFNB1P98172 346 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ZNF91Q05481 1191 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 KRT32Q14532 448 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 PRICKLE4Q2TBC4 344 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ZNF667Q5HYK9 610 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 HAUS3Q68CZ6 603 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ZNF772Q68DY9 489 aaPredicted RBP6.35□□□□□ -1.39
HERC4-213ENST00000506515 CPXM2Q8N436 756 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 NFKBIDQ8NI38 313 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 FAR1Q8WVX9 515 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 C7orf26Q96N11 449 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 FRG2BQ96QU4 278 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 PDCL3Q9H2J4 239 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 TMEM45AQ9NWC5 275 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ZDHHC7Q9NXF8 308 aa6.35□□□□□ -1.39
HERC4-213ENST00000506515 ITIH6Q6UXX5 1313 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 RBMXL2O75526 392 aaKnown RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 BAIAP3O94812 1187 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 TSPY4P0CV99 314 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 TSPY10P0CW01 314 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 RPS13P62277 151 aaKnown RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 HYIQ5T013 277 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 SLC18B1Q6NT16 456 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 ATF7IPQ6VMQ6 1270 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 B4GALNT4Q76KP1 1039 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 YTHDF3Q7Z739 585 aaKnown RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 DDIASQ8IXT1 998 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 TEFMQ96QE5 360 aaKnown RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 ACTR5Q9H9F9 607 aaPredicted RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 ENTPD7Q9NQZ7 604 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 PAPOLBQ9NRJ5 636 aaKnown RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 TMEM184CQ9NVA4 438 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 MAP3K20Q9NYL2 800 aaKnown RBP6.34□□□□□ -1.39
HERC4-213ENST00000506515 CDH22Q9UJ99 828 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 SARDHQ9UL12 918 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 DIP2CQ9Y2E4 1556 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 FAM135AQ9P2D6 1515 aa6.34□□□□□ -1.39
HERC4-213ENST00000506515 TNRQ92752 1358 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 CEP170BQ9Y4F5 1589 aaPredicted RBP6.33□□□□□ -1.4
HERC4-213ENST00000506515 TEX13CA0A0J9YWL9 993 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 C17orf113A0A1B0GUU1 675 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 PABPN1LA6NDY0 278 aaKnown RBP6.33□□□□□ -1.4
HERC4-213ENST00000506515 FOXO6A8MYZ6 492 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 HMGB1P1B2RPK0 211 aaPredicted RBP6.33□□□□□ -1.4
HERC4-213ENST00000506515 F8W810 466 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 SERPINC1P01008 464 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 PTP4A2Q12974 167 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 EDRF1Q3B7T1 1238 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 SUPT20HL1Q3ZLR7 823 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 MIDNQ504T8 468 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 ALG10Q5BKT4 473 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 ALG10BQ5I7T1 473 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms