RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 OR2T34Q8NGX1 318 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 SNX19Q92543 992 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 NUSAP1Q9BXS6 441 aaKnown RBP16.98■□□□□ 0.31
SNCA-209ENST00000506244 SLC39A8Q9C0K1 460 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 KDM4CQ9H3R0 1056 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 SERGEFQ9UGK8 458 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 ZNF292O60281 2723 aa16.98■□□□□ 0.31
SNCA-209ENST00000506244 ZNF821O75541 412 aaPredicted RBP16.97■□□□□ 0.31
SNCA-209ENST00000506244 CD160O95971 181 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 DRD3P35462 400 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 PAPOLAP51003 745 aaKnown RBP16.97■□□□□ 0.31
SNCA-209ENST00000506244 ADPRHP54922 357 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 TAS2R40P59535 323 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 DPYSL3Q14195 570 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 RFTN1Q14699 578 aaPredicted RBP16.97■□□□□ 0.31
SNCA-209ENST00000506244 CCDC6Q16204 474 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 DUOXA1Q1HG43 343 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 TRIM61Q5EBN2 209 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 VSIG1Q86XK7 387 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 LRRC49Q8IUZ0 686 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 ARHGAP12Q8IWW6 846 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 ATPAF2Q8N5M1 289 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 OR14C36Q8NHC7 312 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 DNASE2BQ8WZ79 361 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 FAM131CQ96AQ9 280 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 KLC2Q9H0B6 622 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 NEUROG2Q9H2A3 272 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 C6orf106Q9H6K1 298 aaPredicted RBP16.97■□□□□ 0.31
SNCA-209ENST00000506244 ZDHHC6Q9H6R6 413 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 PDFQ9HBH1 243 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 SARDHQ9UL12 918 aa16.97■□□□□ 0.31
SNCA-209ENST00000506244 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.97■□□□□ 0.31
SNCA-209ENST00000506244 ZNF487B1APH4 448 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 PLRG1O43660 514 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 LEFTY1O75610 366 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 POP4O95707 220 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 CTSLP07711 333 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 AMPD1P23109 780 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 ITGB7P26010 798 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 ARSEP51690 589 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 IL10RBQ08334 325 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 GRM3Q14832 879 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 SF3A2Q15428 464 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 TMCO4Q5TGY1 634 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 AGBL4Q5VU57 503 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 KIAA0895LQ68EN5 471 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 C11orf63Q6NUN7 778 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 SLC23A3Q6PIS1 610 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 NCEH1Q6PIU2 408 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 LEKR1Q6ZMV7 388 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 RHOT1Q8IXI2 618 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 CHST14Q8NCH0 376 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 NETO1Q8TDF5 533 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 NSMCE1Q8WV22 266 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 ZNF599Q96NL3 588 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 KLHL11Q9NVR0 708 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 DDX56Q9NY93 547 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 IPO11Q9UI26 975 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 CDV3Q9UKY7 258 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 ACTL7AQ9Y615 435 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.96■□□□□ 0.31
SNCA-209ENST00000506244 WASF2Q9Y6W5 498 aa16.96■□□□□ 0.31
SNCA-209ENST00000506244 A0A1B0GTW7 788 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 LRRD1A4D1F6 860 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 FAM47DPA6NHR8 397 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 PSTPIP1O43586 416 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 FSBPO95073 299 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 CFIP05156 583 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 SERPINF2P08697 491 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 NUDT1P36639 197 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 CCR5P51681 352 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 NEK3P51956 506 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 VAV2P52735 878 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 CNTN1Q12860 1018 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 POM121L1PQ3SYA9 428 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 ARSIQ5FYB1 569 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 RAD9BQ6WBX8 426 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 KIAA1328Q86T90 577 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 CPNE8Q86YQ8 564 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 BBS5Q8N3I7 341 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.95■□□□□ 0.3
SNCA-209ENST00000506244 FAF2Q96CS3 445 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 ZNF830Q96NB3 372 aaPredicted RBP16.95■□□□□ 0.3
SNCA-209ENST00000506244 CINPQ9BW66 212 aaPredicted RBP16.95■□□□□ 0.3
SNCA-209ENST00000506244 HDAC8Q9BY41 377 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 MIR1-1HGQ9H1L0 117 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 PREBQ9HCU5 417 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 TMEM74BQ9NUR3 256 aa16.95■□□□□ 0.3
SNCA-209ENST00000506244 LNP1A1A4G5 178 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 BTNL10A8MVZ5 291 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 J3KR12 359 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 KRIT1O00522 736 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 BUB1BO60566 1050 aaPredicted RBP16.94■□□□□ 0.3
SNCA-209ENST00000506244 PALMO75781 387 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 KRT1P04264 644 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 CD48P09326 243 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 COMTP21964 271 aa16.94■□□□□ 0.3
SNCA-209ENST00000506244 CD27P26842 260 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms