RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 STK19P49842 368 aaPredicted RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CCL11P51671 97 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 TDGF1P3P51864 188 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 NCKAP1LP55160 1127 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 OR1D5P58170 312 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 RAB15P59190 212 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 MC2RQ01718 297 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 POU5F1Q01860 360 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 STRN3Q13033 797 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 SQSTM1Q13501 440 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 TRA2AQ13595 282 aaKnown RBP eCLIP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 IL10RAQ13651 578 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 TRIP4Q15650 581 aaPredicted RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CALCRLQ16602 461 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 EDRF1Q3B7T1 1238 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ADCK5Q3MIX3 580 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 MAP9Q49MG5 647 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 MPPE1Q53F39 396 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ARSHQ5FYA8 562 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 FSCBQ5H9T9 825 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 C10orf120Q5SQS8 335 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CREB3L3Q68CJ9 461 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 GALNT17Q6IS24 598 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 RINT1Q6NUQ1 792 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 MMS22LQ6ZRQ5 1243 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 Q6ZS92 163 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF765Q7L2R6 523 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 HS2ST1Q7LGA3 356 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 KCNK18Q7Z418 384 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 FAM35AQ86V20 835 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 PIM3Q86V86 326 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 C17orf82Q86X59 251 aaPredicted RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 NT5DC4Q86YG4 428 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 HPS6Q86YV9 775 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 RHOT1Q8IXI2 618 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 PARP9Q8IXQ6 854 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ULK2Q8IYT8 1036 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 FUKQ8N0W3 1084 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CIARTQ8N365 385 aaPredicted RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 B3GALNT2Q8NCR0 500 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ADAMTS17Q8TE56 1095 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CHTF18Q8WVB6 975 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 BTN2A2Q8WVV5 523 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 RNF31Q96EP0 1072 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 COX4I2Q96KJ9 171 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 TEFMQ96QE5 360 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ALPK1Q96QP1 1244 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 SPAG5Q96R06 1193 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 FIZ1Q96SL8 496 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 TWSG1Q9GZX9 223 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 TRIT1Q9H3H1 467 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 NCOA5Q9HCD5 579 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CSNK1G1Q9HCP0 422 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 DMAP1Q9NPF5 467 aaPredicted RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 ST6GALNAC2Q9UJ37 374 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 GPR34Q9UPC5 381 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 KIF3AQ9Y496 699 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 PCDHB3Q9Y5E6 796 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 CSAG2Q9Y5P2 127 aa3.43□□□□□ -1.86
TCOF1-208ENST00000506063 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
TCOF1-208ENST00000506063 PIPSLA2A3N6 862 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 TLCD2A6NGC4 264 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ARGFXA6NJG6 315 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 K7ELQ4 463 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MASP2O00187 686 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 HNRNPDLO14979 420 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MSI1O43347 362 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PROM1O43490 865 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 SPRY1O43609 319 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 NUDT21O43809 227 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 TACC1O75410 805 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 CRLF1O75462 422 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PAK4O96013 591 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ASLP04424 464 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 SRPRAP08240 638 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 OR52Z1P0C646 297 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PLA2G4BP0C869 781 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 TRIM49P0CI25 452 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 TRIM49CP0CI26 452 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 AGAP20933 346 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MUTP22033 750 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MPSTP25325 297 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 IGFALSP35858 605 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PTGIRP43119 386 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MATR3P43243 847 aaKnown RBP eCLIP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 LIG4P49917 911 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 HK3P52790 923 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FOLH1Q04609 750 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 TCEA2Q15560 299 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 CLPPQ16740 277 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 UGT8Q16880 541 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 LONRF1Q17RB8 773 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ALG11Q2TAA5 492 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PDLIM3Q53GG5 364 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 FAM133BQ5BKY9 247 aaKnown RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PITRM1Q5JRX3 1037 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 MPP7Q5T2T1 576 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 PIK3R6Q5UE93 754 aa3.42□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF324BQ6AW86 544 aaPredicted RBP3.42□□□□□ -1.86
TCOF1-208ENST00000506063 XKRXQ6PP77 449 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms