RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 DRD3P35462 400 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 TFAP2DQ7Z6R9 452 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 FBXL6Q8N531 539 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 ACTL9Q8TC94 416 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF641Q96N77 438 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 GBA3Q9H227 469 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 IPO11Q9UI26 975 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 DNAI1Q9UI46 699 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 PHF2O75151 1096 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 POLR2EP19388 210 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 MSNP26038 577 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 RENBPP51606 427 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 RPL26P61254 145 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 CRY1Q16526 586 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 TEX44Q53QW1 395 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 EOGTQ5NDL2 527 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 EP400NLQ6ZTU2 488 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 ST13P5Q8NFI4 369 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZC3H10Q96K80 434 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 ACOX2Q99424 681 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 OSBPL1AQ9BXW6 950 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 RPL26L1Q9UNX3 145 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 PPP1R12AO14974 1030 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 EPOP01588 193 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 HLA-DQB2P05538 268 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 SEMA5AQ13591 1074 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 KIAA1211LQ6NV74 962 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 OR2T3Q8NH03 318 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 TFB1MQ8WVM0 346 aaKnown RBP8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 FOXQ1Q9C009 403 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 PLK2Q9NYY3 685 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 SUN2Q9UH99 717 aa8.42□□□□□ -1.06
CDC42SE2-208ENST00000505065 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PGRMC1O00264 195 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SCAMP3O14828 347 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ATG13O75143 517 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ATP5BP06576 529 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 AP1S1P61966 158 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 KDSRQ06136 332 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 NIPAL4Q0D2K0 466 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SLC10A7Q0GE19 358 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 MTAPQ13126 283 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PPP6R3Q5H9R7 873 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SPDYCQ5MJ68 293 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PIP5KL1Q5T9C9 394 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 Q6ZS52 159 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SYDE1Q6ZW31 735 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SLC25A51Q9H1U9 297 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ITM2CQ9NQX7 267 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 TRMT1Q9NXH9 659 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 DNPEPQ9ULA0 475 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SIT1Q9Y3P8 196 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SAR1BQ9Y6B6 198 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 TTC34A8MYJ7 566 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 RNF40O75150 1001 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ATXN1LP0C7T5 689 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 GABRG2P18507 467 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SP100P23497 879 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ITGB7P26010 798 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 STK19P49842 368 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 DGKEP52429 567 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 GDF10P55107 478 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PTK6Q13882 451 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ELAVL3Q14576 367 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 CARD16Q5EG05 197 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 DENND5AQ6IQ26 1287 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF534Q76KX8 674 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZSWIM9Q86XI8 627 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 CDKL3Q8IVW4 592 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF567Q8N184 647 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 DTWD2Q8NBA8 298 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 OR2AP1Q8NGE2 309 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 SGSM3Q96HU1 749 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 RUNDC3BQ96NL0 473 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PABPC3Q9H361 631 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PLRG1O43660 514 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PTMAP06454 111 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 STIP1P31948 543 aaKnown RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 MAPK8P45983 427 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 TAS2R38P59533 333 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF211Q13398 564 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 MAP7D1Q3KQU3 841 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMEM52BQ4KMG9 183 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 NLRP8Q86W28 1048 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 MMGT1Q8N4V1 131 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 NAT16Q8N8M0 369 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 HTR3CQ8WXA8 447 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 PPP1R2P1Q96PQ5 205 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 LGMNQ99538 433 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 MLPHQ9BV36 600 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 LMAN1LQ9HAT1 526 aa8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 UBA2Q9UBT2 640 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE2-208ENST00000505065 A0A1W2PQ67 120 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 FAM170BA6NMN3 283 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 CCDC188H7C350 402 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 K7ERQ8 282 aa8.4□□□□□ -1.06
CDC42SE2-208ENST00000505065 KCNK3O14649 394 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms