RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 TPM4P67936 248 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ZBED6P86452 979 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 GNA12Q03113 381 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 DUOXA1Q1HG43 343 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ACCSLQ4AC99 568 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 KCNT1Q5JUK3 1230 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 RWDD4Q6NW29 188 aaKnown RBP8.18□□□□□ -1.1
RFC1-207ENST00000504554 DCUN1D2Q6PH85 259 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 NCEH1Q6PIU2 408 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 TMC6Q7Z403 805 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 SLFN11Q7Z7L1 901 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 HDDC3Q8N4P3 179 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ZCCHC9Q8N567 271 aaKnown RBP8.18□□□□□ -1.1
RFC1-207ENST00000504554 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 OR2A12Q8NGT7 310 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 SYN2Q92777 582 aaPredicted RBP8.18□□□□□ -1.1
RFC1-207ENST00000504554 ARHGEF2Q92974 986 aaKnown RBP8.18□□□□□ -1.1
RFC1-207ENST00000504554 FAM131CQ96AQ9 280 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ARRDC3Q96B67 414 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 BIRC7Q96CA5 298 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ZNF653Q96CK0 615 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 TBC1D31Q96DN5 1066 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 VCPIP1Q96JH7 1222 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 BTBD6Q96KE9 485 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 SPON2Q9BUD6 331 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ACE2Q9BYF1 805 aaPredicted RBP8.18□□□□□ -1.1
RFC1-207ENST00000504554 BTBD1Q9H0C5 482 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 THAP2Q9H0W7 228 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 MIR1-1HGQ9H1L0 117 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 TNKS2Q9H2K2 1166 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 FBRSQ9HAH7 460 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 IL21RQ9HBE5 538 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 PARVAQ9NVD7 372 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 TMEM248Q9NWD8 314 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ARHGAP20Q9P2F6 1191 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 MYO1AQ9UBC5 1043 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 PCSK1NQ9UHG2 260 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 SLC25A13Q9UJS0 675 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 PPM1HQ9ULR3 514 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 SLC6A14Q9UN76 642 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.18□□□□□ -1.1
RFC1-207ENST00000504554 PAXBP1Q9Y5B6 917 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 THADAQ6YHU6 1953 aa8.18□□□□□ -1.1
RFC1-207ENST00000504554 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 PCDH15Q96QU1 1955 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 SPAG17Q6Q759 2223 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 FAM47DPA6NHR8 397 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 MEI4A8MW99 385 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 CBX4O00257 560 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 SPINT1O43278 529 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 CREB3O43889 395 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 BNIP3LO60238 219 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 FOXD2O60548 495 aaPredicted RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 LRCH4O75427 683 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 FSBPO95073 299 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 SERPING1P05155 500 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 GOT1P17174 413 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 PSMA2P25787 234 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 L1CAMP32004 1257 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 GKP32189 559 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 HOXD12P35452 270 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ADPRHP54922 357 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TAS2R38P59533 333 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 PPP2CBP62714 309 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 PPP2CAP67775 309 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 KRT83P78385 493 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 CNTN1Q12860 1018 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 GRIK2Q13002 908 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ELAVL3Q14576 367 aaKnown RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 ASTE1Q2TB18 679 aaPredicted RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 ARL13BQ3SXY8 428 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TDRD12Q587J7 1177 aaKnown RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 PPM1JQ5JR12 505 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 WDR45BQ5MNZ6 344 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ACBD5Q5T8D3 534 aaPredicted RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 AGBL4Q5VU57 503 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TXNRD3NBQ6F5E7 133 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 C22orf39Q6P5X5 142 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 USP30Q70CQ3 517 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ERMP1Q7Z2K6 904 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TP53INP2Q8IXH6 220 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ATP11CQ8NB49 1132 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
RFC1-207ENST00000504554 PIP4K2CQ8TBX8 421 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 GANCQ8TET4 914 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
RFC1-207ENST00000504554 SNRNP25Q9BV90 132 aaKnown RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 C2orf49Q9BVC5 232 aaPredicted RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 GTPBP2Q9BX10 602 aaKnown RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 NUSAP1Q9BXS6 441 aaKnown RBP8.17□□□□□ -1.1
RFC1-207ENST00000504554 PACSIN1Q9BY11 444 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 SGK2Q9HBY8 427 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ATP13A1Q9HD20 1204 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TM9SF3Q9HD45 589 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TMEM9BQ9NQ34 198 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 ZNF358Q9NW07 568 aa8.17□□□□□ -1.1
RFC1-207ENST00000504554 TMEM51Q9NW97 253 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms